Gene Nham_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4421 
Symbol 
ID4025281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007960 
Strand
Start bp66498 
End bp66917 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content56% 
IMG OID637964929 
ProductMerR family transcriptional regulator 
Protein accessionYP_571837 
Protein GI92109550 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0298638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACCA TCGGCAAATT GGCTTCCCTC ACAAGCGTTA GCAACGACAC GTTGCGCTAT 
TACGAACAGG AAGGCTTGGT CGAGCCTGCA GGGAAAAGTC CCGCTGGTTA TAGGCTGTAC
GACAAGGACT CAGCACGGCG CATCCGCTTC ATCAAGCATG CCCAGAACTG CGGCTTCACG
CTCGCGGAGA TACGCGATCT CCTCGTCTTG CGGGGACGCG ACAAGGCCTG TTGCGGCGAC
GTCCGCACCC GAGCCGTCGA AAAAAAATTG CAGATCGAAA GCAAGATTCG CGCGATGAAG
GCGATGTCCA AGGCGCTCGA TGAACTGATT GCCGACTGCG CGAACGAAAC CCAGCCAGTA
AACGAGTGCA CGATTATCGC CGCTCTGGAA CGAGCCAACG TCAAGACACC GGTGCATTAA
 
Protein sequence
MFTIGKLASL TSVSNDTLRY YEQEGLVEPA GKSPAGYRLY DKDSARRIRF IKHAQNCGFT 
LAEIRDLLVL RGRDKACCGD VRTRAVEKKL QIESKIRAMK AMSKALDELI ADCANETQPV
NECTIIAALE RANVKTPVH