| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4404 |
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| Symbol | |
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| ID | 4025264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | - |
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| Start bp | 51243 |
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| End bp | 54440 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637964912 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_571820 |
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| Protein GI | 92109533 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCC GCCTGATCGC CTGGTCGGCG CGGAATTTGA TGCTCGTCCT GATCGGGGCA
GTGTTCGCGA TCGCGGCGGG CATCTATGCG CTGCGCACCC TGCCGCTCGA TGCCATCCCC
GACCTCTCCG ACGTGCAGGT GATCGTCTAC ACAGAATATC CTGGGCAAGC GCCGCAGGTC
GTCGAAGATC AAGTGACCTA TCCGTTGACC ACGGCGATGC TGACGGTGCC GAAATCGAAG
GTGGTGCGGG GCTTCTCATT TTTCGGCGTG TCCTTCGTCT ACGTCATCTT CGAGGACGGC
ACCGACCCCT ATTGGGCCCG AAGTCGCGTG CTGGAATATC TCAACACCGT AGCGCGCCGG
CTTCCTACCG GCGTGACACC CACTCTTGGG CCCGACGCAA CCGGCGTGGG CTGGGTCTAT
CAATACGCCG TCGTGGCCAA GAACATGACC CTCGCCGAAC TGCGGTCGGT CCAGGACTGG
ATCATCCGGT ACGGCATTTC CAAAGCCGAA GGCGTCGCGG AAGTGGCCAG CGTCGGCGGC
TTCGTCAAGC AGTACAACAT CGTCGTCGAT CCGCAAAAAC TGCGCGCCCA GGGCATTTCC
CTGGACAAGC TCCGCAGTGC CGTCCGGGCC AGCAACATGG ATGTCGGCGG GCGCACCGTA
GAACTGTCCG AGTTTGAATT CGTCGTCCGC GGCCGCGGCT ACCTCAGGGG CATCGAGGAC
ATCGAGAACA TCGTGCTGAA GACCGACGCG GGGACTCCGC TTCGATTGCG GGACGTTGCT
CGCGTCGAAC TCGGCCCCGA CGAGCGGCGA GGAATTACCG AACTCAACGG CGACGGCGAG
GTCGTCAGCG GCATCGCACT GCAGCGGTTC GGCGCCAACG CCCTCACCGT CATCGACAAT
GTCAAGGCGC GTCTTTCAGA GATCGCCTCA AGCCTGCCCA AGGGCGTCGA CATCGTCACG
GTTTATGATC GCTCCGAACT GATCAAGGCG GCCATCGAGA CGCTCAAAGG AACCCTGCTC
GAAGAGAGCA TCATCGTTGC CTTGGTTTGC TTTGTCTTCC TGCTTCACCT GCGCAGTGCG
CTCGTCGCCA TCCTGATGCT TCCCGTCGGT ATCCTGATGG CCTTCGCCGC CATGAAATTC
ATGGGGCTGG GCGCCAACAT CATGAGCCTT GGCGGTATCG CCATCGCGGT CGGCGCCATG
ATCGACGCCG CGATCGTCAT GATCGAAAAT GCGCACAAGC ACCTGGAGCG CGCGGAGCCC
GGAACGCCGC GAACACAAAT CCTCATCGAT GCGGCGAGCG AGGTCGGACC GGCGCTGTTC
TTCAGTCTGT TGGTGATCAC CGTCGCGTTC CTGCCGATCT TTACCCTGGA GGACCAGGAA
GGACGCATGT TCGGGCCGCT CGCCTACACC AAGACATTTT CGATGGCCGC GGCCGCCCTG
CTCTCGATCA CGTTGGTACC TGCCCTGATG GTCGTCTTCG TCCGCGGGCG GATCATCTCG
GAACACAAGA ATCCCGTGAA CCGGTTCCTG ATCTGGGTGT ACCGACCGGT GATCCGGTGG
GTTCTCAACG CCAAGACATT GACGATCATG CTTGCGTTGG TTGCGCTTGC GGTGACGGTC
TGGCCCGCCC GCCAACTCGG CAGCGAGTTC ATGCCGAGCC TAAATGAAGG CACCTTGATG
TACATGCCGA CGACGCTGCC CGGCCTGTCC ATCACCAAGG CCGCGGAGTT GTTGCAGACC
CAGGATCGCA TCATCAAGTC ATTTCCCGAA GTTGCATCGG TCTATGGCAA GGCGGGCCGC
GCCTCGACCG CGACCGATCC GGCGCCCACC GAAATGTTCG AGACCATCAT CAATCTAAAG
CCGAAGTCGG AATGGCGGCC TGGCGTAACG ATTGACAGCC TCAAGGCCGA GATGGACAAG
GCGCTCCAGT TTCCGGGGGT CTCGAACGCC TGGACGATGC CGATCCGCGC CCGCATCGAC
ATGCTGTCGA CCGGAATCCG CACCCCCGTC GGGATCAAGA TTTTCGGCAA GGATCTTGCG
GAAATGGAGA AGATCGCCCG CGAAGTCGAA GGGGTGGTCA GATCGGTGCC GGGTACCTCA
AGCGCTTACG CCGAGCGCGT GATCGGCGGA TACTATCTCG AGATTATCCC CGATCGGATG
GCGCTCGGAC GCTACGGATT GACGATCAGC GACGTCCAGG ACGTGATCTC GACGGCACTC
GGCGGCGAAA CCGTCACCAC GACGGTCGAA GGCCGGGAAC GTTATTCCGT CAACATCCGG
TATCCGCGCG CCCTGCGCTC CAACCCGCAA ACGATCAGCA CCGACGTCCA GGTGCCGCTG
GCGTCCGGCG GAAGCGTCCC GCTCGGCCAG GTCGCCAGCG TAAAATTGAC CCGCGGCGCG
ACGTCGATCC GCACCGAGAA CGGGCAACTT GCGGTTTACA TCTACGTCGA CATTACCGGT
CGCGATCTGG GCGGCTATGT CGCGGAGGCA CAGCACGCGG TCGCGCAGAA GGTAAAGTTT
CCACCGGGAT ATTACGTCTC CTGGAGCGGA CAGTTCGAGT ACCTGCAACG CGCCGAAGCG
CGGCTCAAGA TCGTCGTGCC GGTGACGTTG CTGATCATCT TCCTACTGCT CTACCTGAAT
TTCCGAAAGT TGGCCGACAC CCTGATCGTG ATGCTGTCGT TGCCGTTCTC GCTGGTCGGC
GGCATCTGGC TGATGTGGTG GCTCGGATTC AACATGTCGG TCGCGGTCGC CGTCGGCTTC
ATCGCGCTGG CGGGCGTCGC GGCCGAGACC GGCGTCGTCA TGCTGATCTA CCTCGAGCAG
GCCATGGCCG AATTGAAGGC GGAACGCGCG GCCGCGGGAC GGCCGTTCAC GCGTGCCGAC
CTGTACGACG CGATCATGCT CGGCGCGGTC GACCGGGTGC GGCCCAAGAT GATGACCGTT
GTCGCCATCA TGGCGGGGTT GTTGCCGATT CTCTGGAGCA CAGGCACCGG TTCGGAGGTC
ATGCAGCGGA TCGCCGTCCC GATGATCGGC GGCATGGCCT CATCAACCGT GCTGACCCTC
GTGGTCATTC CCGCCATTTT TGCGGTCGTC AAGGGGTTCG GGTTGCCCGC GGCGCCGCAG
GACGGCGAAG AGAAAGGCGG CGGGCGGCGG GATTCGACGC CGAAGCTCGA CCTGCATCGT
GCGGAGAACG TGCAGTGA
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| Protein sequence | MIARLIAWSA RNLMLVLIGA VFAIAAGIYA LRTLPLDAIP DLSDVQVIVY TEYPGQAPQV
VEDQVTYPLT TAMLTVPKSK VVRGFSFFGV SFVYVIFEDG TDPYWARSRV LEYLNTVARR
LPTGVTPTLG PDATGVGWVY QYAVVAKNMT LAELRSVQDW IIRYGISKAE GVAEVASVGG
FVKQYNIVVD PQKLRAQGIS LDKLRSAVRA SNMDVGGRTV ELSEFEFVVR GRGYLRGIED
IENIVLKTDA GTPLRLRDVA RVELGPDERR GITELNGDGE VVSGIALQRF GANALTVIDN
VKARLSEIAS SLPKGVDIVT VYDRSELIKA AIETLKGTLL EESIIVALVC FVFLLHLRSA
LVAILMLPVG ILMAFAAMKF MGLGANIMSL GGIAIAVGAM IDAAIVMIEN AHKHLERAEP
GTPRTQILID AASEVGPALF FSLLVITVAF LPIFTLEDQE GRMFGPLAYT KTFSMAAAAL
LSITLVPALM VVFVRGRIIS EHKNPVNRFL IWVYRPVIRW VLNAKTLTIM LALVALAVTV
WPARQLGSEF MPSLNEGTLM YMPTTLPGLS ITKAAELLQT QDRIIKSFPE VASVYGKAGR
ASTATDPAPT EMFETIINLK PKSEWRPGVT IDSLKAEMDK ALQFPGVSNA WTMPIRARID
MLSTGIRTPV GIKIFGKDLA EMEKIAREVE GVVRSVPGTS SAYAERVIGG YYLEIIPDRM
ALGRYGLTIS DVQDVISTAL GGETVTTTVE GRERYSVNIR YPRALRSNPQ TISTDVQVPL
ASGGSVPLGQ VASVKLTRGA TSIRTENGQL AVYIYVDITG RDLGGYVAEA QHAVAQKVKF
PPGYYVSWSG QFEYLQRAEA RLKIVVPVTL LIIFLLLYLN FRKLADTLIV MLSLPFSLVG
GIWLMWWLGF NMSVAVAVGF IALAGVAAET GVVMLIYLEQ AMAELKAERA AAGRPFTRAD
LYDAIMLGAV DRVRPKMMTV VAIMAGLLPI LWSTGTGSEV MQRIAVPMIG GMASSTVLTL
VVIPAIFAVV KGFGLPAAPQ DGEEKGGGRR DSTPKLDLHR AENVQ
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