Gene Nham_4400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4400 
Symbol 
ID4025260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007960 
Strand
Start bp49533 
End bp49976 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content58% 
IMG OID637964910 
Producthypothetical protein 
Protein accessionYP_571818 
Protein GI92109531 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAC GACTGTTTTG CCTGGCGACG GCCGCGACGC TCGCCGGATT GCCGCTTGCG 
TCTCGTGCGG AGACGCTCCA CGCCACCTTG TACAAAAATC CCGATTGCAG CTGCTGCGAA
GGCTACGCCA CCTACCTGCG CGACAATGGA TTTGCAGTCG ACGTCAAGCC CACCAATGAC
CTCGCCCAGA TCAGTCTCAA CGCCGGGATT CCGGAGAACC TGCAGGGTTG TCATACCATG
TTCATCGATG GTTACGTCGT TGATGGACAT GTGCCGATCA AAACGATCCG GAAACTGCTG
ACCGAAAGGC CCACGATCGC TGGCATCACG CTGCCGGCCA TGCCGACCGG GTCTCCAGGC
ATGGTAGGCC AGAAGAGAGG ACCGTTTACG ATTTATGCCG TCGCCAAGGA TGGGACGGTG
CCAACCGTTT ATGCGACCGA ATAA
 
Protein sequence
MNRRLFCLAT AATLAGLPLA SRAETLHATL YKNPDCSCCE GYATYLRDNG FAVDVKPTND 
LAQISLNAGI PENLQGCHTM FIDGYVVDGH VPIKTIRKLL TERPTIAGIT LPAMPTGSPG
MVGQKRGPFT IYAVAKDGTV PTVYATE