Gene Nham_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4396 
Symbol 
ID4025256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007960 
Strand- 
Start bp45704 
End bp46390 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content58% 
IMG OID637964906 
ProductLuxR family transcriptional regulator 
Protein accessionYP_571814 
Protein GI92109527 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCAGA CGAGAACTGC GGCCGAAATC GAAGATTGCC TTCTGGGGCT CGCGGCGGGG 
TTCGGCTTTA CCGGTCTCTT CGGGGGCATC GTGCCGACAC GCCCAGCGCC ACTGGCTGAA 
CTTCGCTCAC GAATCCTGTT CCAGCGCTTT CCAGCGCAAT GGTTAGATCG CTACAGCAGG 
AAGGGATACG TATTTCGCGA TCCGATCATT CAGCACCTTT TTCATGAACG GGCGCCGTTC 
ACCTGGCACG AGGGCTACGA GAGCTGCCCT CAGCGTAGGA ATGTTAGGCT AATACGAGGC 
GAAGCCGCGG AATTCGGACT ACGCGACGGT TACGTTGTGC CGATTTCGAC AATAGACGGT 
GAGATTGCGT CTTTGTCGTT CGGCGGACCG GGAACGCTTC CGGTTTCGGC CGATCTCTCA 
GTGCTGAACT TTGCGGCCAG CTACGCCTTG GGCCGGCATC TCCATCGCAT TGCGACCTGG 
CAACGCGTCA GTAGCAATCT GACCGCACGG GAATGGGATT GTCTGCTTTG GGCGGGCGAG 
GGAAAGACGA ACTGGGAAAC TTCGGCGATT CTTGGAATCT CAAGATCAAC CGTGACCAAG 
CATATCATGG CGGCGCGCGC GAAGCTTGGT GCAGTCAGCA AAGCTCATGC CATTGCCACG 
GCGATTCGGA CGAAGCTCCT TCGCTGA
 
Protein sequence
MEQTRTAAEI EDCLLGLAAG FGFTGLFGGI VPTRPAPLAE LRSRILFQRF PAQWLDRYSR 
KGYVFRDPII QHLFHERAPF TWHEGYESCP QRRNVRLIRG EAAEFGLRDG YVVPISTIDG 
EIASLSFGGP GTLPVSADLS VLNFAASYAL GRHLHRIATW QRVSSNLTAR EWDCLLWAGE 
GKTNWETSAI LGISRSTVTK HIMAARAKLG AVSKAHAIAT AIRTKLLR