Gene Nham_4379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4379 
Symbol 
ID4025239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007960 
Strand
Start bp31364 
End bp31984 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content61% 
IMG OID637964894 
Producthypothetical protein 
Protein accessionYP_571802 
Protein GI92109515 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.686834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGA TCGATCGGCA AGCCCACTGG GAAAACGTGT ACCGCACCAA GCGAGAGTAT 
GAAGTCAGCT GGTTTCAGGA GAACCCGGCG CCATCCCTGG AGCTTATTGC ACGTGCCGGC
TTGTCCAACG AAGCGGAGAT CATCGACATC GGTGGCGGCG CCTCACGCCT GGTTGATGGT
CTCATCGACC GCCGGTTTCG CCGCATCACT GTGCTCGATC TCTCGGCGGC CGCCCTTGCC
GACGCGAAAA CACGTCTTGG CCGCGCCGGC GCCGGGGTAG AATGGGTTGT CGCGGATGTT
ACGCGATGGC ACCCGACGCG TACCTACGAT CTCTGGCACG ACCGGGCTGC GTTCCATTTC
CTGACGGACC CGACTGATCG TGAGGCTTAC ATTGCGTGCC TCAAAAAGGC CGTCGGCCCA
AGCGGGCATG TCGTCATCGG CACGTTTGCG CCGGACGGTC CGGAGCGGTG CAGCGGACTG
CGGATCATAC GCTATGACGC CGATGCTCTT GCCGCCGTGG TCGGAGCGGA ATTTACATTG
GTCGATTGTC GGCGGCACGA TCATTTGACC CCGGGCGGCA ATACGCAGCA TTTTCAATTC
AGCGTCTTCC AAAGAAATTG A
 
Protein sequence
MDEIDRQAHW ENVYRTKREY EVSWFQENPA PSLELIARAG LSNEAEIIDI GGGASRLVDG 
LIDRRFRRIT VLDLSAAALA DAKTRLGRAG AGVEWVVADV TRWHPTRTYD LWHDRAAFHF
LTDPTDREAY IACLKKAVGP SGHVVIGTFA PDGPERCSGL RIIRYDADAL AAVVGAEFTL
VDCRRHDHLT PGGNTQHFQF SVFQRN