| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4369 |
|---|
| Symbol | |
|---|
| ID | 4025229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007960 |
|---|
| Strand | - |
|---|
| Start bp | 18116 |
|---|
| End bp | 18892 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637964884 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_571792 |
|---|
| Protein GI | 92109505 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC TGATCGTTTT CGACCTGGAT GGTACAATTG CTGAAAGCAA ATCGTCGCTT
GATGACGAAA TGTCGGCACT TCTGCGCGAC CTTCTTAGCA TCGTCAAAGT CGCGGTCATT
TCCGGCGGAA ACTGGCCACA ATTCGAAAGG CAATTGGTTT CGAATCTCCC CCGCGATGCA
AATCTTGAGA ACCTATCCCT CCTCCCGACG TGCGGAACGA AGTTCTACAG ATACGGTTCA
GCCTGGGAAG AACTCTATTC GGAAAACTTC ACCGATGAGG AGAAGACGAA AATTATTGGT
TCCTTGCACC AGGCGGTTGG AGCATTGGGC TTCAACGCCG AAATGGTCTG GGGGGAGCCG
ATTGAGGACC GAGAAAGTCA GATCACTTTC TCCGCGCTAG GTCAGGAGGC TCCCTTGGAA
GAGAAGAAGA AGTGGGACCC GGATTTTTCC AAGCGAAAGC AGATAAAAGC ATTCCTTGAT
AACTCTATTC CCGAGTTTTC CGTGCGCTTG GGTGGAACGA CTTCCGTGGA TGTCACCAAG
CAGGGCATCG ACAAAGCCTA CGGGATTAAA AAACTCCGAG ACATTCTGGG CGTCGCAATC
AGCGAGATGA TCTTTATCGG GGATGCCTTG TTCCCCGGCG GAAACGACTA TCCGGCCAAG
GAAGCAGGGG TTGTTTCTAT CCAGGTCAGG GATCCCAATG AGACGAAACG GGTTATCGAA
GCCATCATTG CTTGTTTAGA CAGCAAGCGC GACCAAGTGA GCCGACGCAA TGAGTGA
|
|---|
| Protein sequence | MKTLIVFDLD GTIAESKSSL DDEMSALLRD LLSIVKVAVI SGGNWPQFER QLVSNLPRDA
NLENLSLLPT CGTKFYRYGS AWEELYSENF TDEEKTKIIG SLHQAVGALG FNAEMVWGEP
IEDRESQITF SALGQEAPLE EKKKWDPDFS KRKQIKAFLD NSIPEFSVRL GGTTSVDVTK
QGIDKAYGIK KLRDILGVAI SEMIFIGDAL FPGGNDYPAK EAGVVSIQVR DPNETKRVIE
AIIACLDSKR DQVSRRNE
|
|---|
| |