| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4361 |
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| Symbol | |
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| ID | 4025221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 7589 |
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| End bp | 8146 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637964876 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_571784 |
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| Protein GI | 92109497 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.779824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAGCC ACGAGACCGA ACTGAAGGCA CTTATGCTTG CCAGCCTGGA TGGCGACGCG
GTCTCGCACC GCGCACTGCT TGATCAATTG AGCCGCTATC TGCGGGCGTT CTACAAACGC
CATCTGGACC GCATCGGGCG AGGTCCCGAG GAGGCGGAGG ATCTGGTGCA GGAAGCCCTG
CTGGCAATCC AGCTCAAGCG TCACACGTTT GACGTCGAGA CGCTGCTGAC CCCGTGGGTA
CATGCGATCG CACGCTACAA GCTGATTGAC TATCTCCGGC GCAATCGCGC GTTGCTGGCG
TATTTGCCGA TCGGGGATCA CCACGAACTC GCGGCGGCCG ACGATCAGAT CGCCGTCGAG
AGCACGCACG ACATCGGGCA GTTGCTGAAC CGTCTGCCAA CGAAGGTCCG TCATGCGATT
GAGAGCGTGA AGCTCGAGGG TCGAAGCGTC GCAGAAACAG CCGTCCGGTA CGATATGACG
GAATCGGGCG TTAAGATCAG CATCCATCGC GGCATCAAGG CTTTGGCGAA ACTGATCGGC
AGGGAGACCA GGGCATGA
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| Protein sequence | MMSHETELKA LMLASLDGDA VSHRALLDQL SRYLRAFYKR HLDRIGRGPE EAEDLVQEAL
LAIQLKRHTF DVETLLTPWV HAIARYKLID YLRRNRALLA YLPIGDHHEL AAADDQIAVE
STHDIGQLLN RLPTKVRHAI ESVKLEGRSV AETAVRYDMT ESGVKISIHR GIKALAKLIG
RETRA
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