| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4359 |
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| Symbol | |
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| ID | 4025219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 3434 |
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| End bp | 6616 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637964874 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_571782 |
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| Protein GI | 92109495 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCC GCCTAATCGC CTGGTCGGCC CGCAACCTGC TGCTGGTGTT CTTCGGTACC
GGTTTCGCCG CAGCCGCGGG AATCTATGCG CTGGTCCACT TGCCGCTCGA CGCCATCCCC
GATCTCTCCG ATACCCAAGT CATCGTCTAC ACCGAATATC CGGGCCAGGC CCCGCAAGTG
ATCGAGGATC AGGTCACCTA TCCGCTGACG ACGGCGATGC TGACCGTTCC CCACTCCAAG
GTCGTCCGCG GCTTCTCGTT CTTCGGCGTC TCCTTTGTCT ACGTCATCTT CAAGGACGGC
ACCGACATCT ACTGGGCGCG CTCGCGCGTT CTTGAATCCC TCAATAGCGC GGCATCACGG
TTGCCGGCCG GGGTCACCCC TACGATCGGG CCGGACGCTA CCGGCGTCGG CTGGGTCTAC
CAGTATGCGG TGATGTCGAA GGAATTGAAC CTTTCCGACA CCCGCGCTAT CCAGGACTGG
AATCTGAAGT TCGCGCTGGC AAAGGCTGAG GGCGTGGCCG AGGTCGCAAG CGTCGGCGGT
TTCGTCAAGC AATACAACGT CATCCTCGAT CCACAGCGCA TGCGCGATCT CGGCATTACG
ATGCAGAAGA TGCGCGACGC GATCCGCGCC AGCAACGCCG ATGTCGGCGG CCGCACCGTA
GAGCTGTCGG AGTTTGAATA CGTTATTCGC GGCAAGGGCT ATCTGAAAGA CATCAACGAT
CTGGGCAGCA TCGTTCTGAA GACCAACAAC GGCACCCCGG TTCTGCTGAA GGATGTCGCC
CGCGTCGAAT TGGGTCCGGA CGAGCGACGC GGCATCGCCG AATTGAACGG CGAGGGTGAA
GTCACAAGCG GCATCGTGCT GCAGCGGTTC GGGGGCAATG CGCTCGACGT GATCCGGAAC
GTCAAAAAGC GATTCAAGGA AATCGCCAGC AGCCTGCCGA AATCAGTGGA TATCGTGCCG
GTTTATGACC GCTCGAATTT GATCATCGCA GCCATCGCGA CCCTCAAACA CACGCTGCTT
GAGGAAAGCG CGGTGGTCGC GCTGGTGTGC ATCATATTCC TGCTGCACGT CCGCAGCGCT
CTGGTGGCGA TCCTGATGCT GCCGGTCGGC GTGCTGATGG CGTTCGGTGC GATGAAACTG
CTGGGGCTCG GCTCCAATAT CATGAGCCTC GGCGGCATCG CGATCGCGAT CGGCGCCATG
GTCGACGCCG CGATCGTCAT GATCGAAAAC GCCCACAAGC ACCTGGAGCG GGCCGAGCCC
GGACGCTCGC GGGTCAATAT CCTGATCGAT GCGGCCTCTG AGGTCGGTCC GGCGCTGTTC
TTCAGCCTGC TGATCATCAC GGTGTCGTTT ATGCCGATCT TCACTCTGGA ATCGCAGGAG
GGACGAATGT TCAGTCCCCT GGCGTTCACC AAGACGTTCT CCATGGCGGC GGCAGCGCTG
TTGTCCGTGA CTCTTGTTCC GGCCTTGATG ATCGTCTGCG TCCGCGGCCG CATCGTCCCG
GAGCACAAGA ACCCGATCAA CCGCTTCCTG ATCTGGATCT ATCGCCCGGT GATCAGGGGC
GTGATGCGCG CCAAGACGCT GGTGATCCTG CTCGCGCTTG GCGTGCTGGC GGTCTCCGTC
TGGCCGGCGC GCCAGCTTGG CACCGAATTT ATGCCCAACC TGAACGAGGG CACGCTGCTT
TACATGCCGA CGACGCTGCC GGGCATTTCG GTGACCAAAG CAGGCGAACT GCTGCAAACC
CAGGACAGGA TCATCCGGTC GTTTCCGGAG GTCGCATCAG TGTTCGGCAA GGCCGGACGT
GCGTCGACCG CCACCGATCC GGCGCCGTCA GAAATGTTCG AAACCATCAT CAATCTCAAG
CCGAAGGAGC AATGGCGCCC GGGCGTGACG ATCGACAGTC TGACCGCCGA GATGGACAAG
GCGCTGCAAT TCCCCGGCGT CTCCAACGCC TGGACCATGC CGATCAAGGC GCGCATCGAC
ATGCTGTCGA CGGGTATCCG AACCCCGGTC GGGGTAAAGG TGATCGGCAT CGATCTAGTC
GAGATCGACA AGCTCGCCAA GCAGATCGAA CGGGTCTTGA AGGTCGTGCC CGGAACATCG
TCGGCCTACG CCGAGCGCAC GATCGGCGGA TACTATCTGG ACATCACGCC GGATCGTGCG
GCATTGGCGC GCTACGGCAT CATGATCCAG GACGTGCAGG ACGTCATCGC GACGGCGCTG
GGCGGACAAA CGGTCACGAC AACGGTGGAA GGCCGCCAGC GCTTCACCGT CAACATGCGT
TACCCGCGCG CGCTGCGCAG CGATCCGCAA TCAATTGCCA ACGTCCTGGT GCCGATGCCG
GGTGGAGGTG CGGTGCCGCT CGGCGAAGTC GCCAAGATCG CGCCGACGCG CGGGCCGACG
TCGATCCGTA CCGAAGATGG ACAACTGGCC AGTTACATCT ATGTCGACAT CCGCGATCGC
GACCTCGGTG GTTACGTCGC CGACGCGCAG AAGGCGGTGC AGGCGAGCAT CCAGTTTCCG
CCGGGTTACT ATGTGGTCTG GAGCGGTCAG TACGAATATC TCGAGCGCGC CACAGCGCGG
CTCAAGATTG TGGTTCCGGT AACGCTGCTG ATCATCTTCC TGCTGCTCTA CCTCAACTTC
CGTTCTTTGA CGGAAACCAT GATCGTGATG CTGTCGCTGC CGTTCGCGCT GGTCGGCGGG
CTATGGCTGA TGTGGGCGCT TGGCTTCAAT TTGTCGGTCG CCGTCGCCGT CGGCTTCATC
GCGCTGGCCG GCGTCGCCGC CGAGACCGGC GTGGTGATGT TGATCTACCT CAACCAGGCA
CTGGCCGAGA TCAAAGCGCG AAGGTTGATC GAGGGCCGGG CCCTCATGCG CACTGACCTC
TACGATGCCG TCATGGAGGG CGCGGTCGAA CGCGTGCGGC CGAAGATGAT GACGGTCGTC
GCCATCATGG CCGGCCTGCT GCCGATCATG TGGAGCACCG GCACGGGCTC GGAAATCATG
CAGCGAATCG CTGTGCCGAT GATCGGCGGC ATGATCTCCT CGACGCTGCT GACGCTGATC
GTGATCCCGG CGATCTTCGC CCTCGTCAAA GGTTTTAGGC TGCCGAACGG CGTTAATCGA
TCTACAACGC CGACGACTCC GACGATGCGC GCGGCACGAC GGATTCCAGA GCCGGCCGAA
TGA
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| Protein sequence | MIARLIAWSA RNLLLVFFGT GFAAAAGIYA LVHLPLDAIP DLSDTQVIVY TEYPGQAPQV
IEDQVTYPLT TAMLTVPHSK VVRGFSFFGV SFVYVIFKDG TDIYWARSRV LESLNSAASR
LPAGVTPTIG PDATGVGWVY QYAVMSKELN LSDTRAIQDW NLKFALAKAE GVAEVASVGG
FVKQYNVILD PQRMRDLGIT MQKMRDAIRA SNADVGGRTV ELSEFEYVIR GKGYLKDIND
LGSIVLKTNN GTPVLLKDVA RVELGPDERR GIAELNGEGE VTSGIVLQRF GGNALDVIRN
VKKRFKEIAS SLPKSVDIVP VYDRSNLIIA AIATLKHTLL EESAVVALVC IIFLLHVRSA
LVAILMLPVG VLMAFGAMKL LGLGSNIMSL GGIAIAIGAM VDAAIVMIEN AHKHLERAEP
GRSRVNILID AASEVGPALF FSLLIITVSF MPIFTLESQE GRMFSPLAFT KTFSMAAAAL
LSVTLVPALM IVCVRGRIVP EHKNPINRFL IWIYRPVIRG VMRAKTLVIL LALGVLAVSV
WPARQLGTEF MPNLNEGTLL YMPTTLPGIS VTKAGELLQT QDRIIRSFPE VASVFGKAGR
ASTATDPAPS EMFETIINLK PKEQWRPGVT IDSLTAEMDK ALQFPGVSNA WTMPIKARID
MLSTGIRTPV GVKVIGIDLV EIDKLAKQIE RVLKVVPGTS SAYAERTIGG YYLDITPDRA
ALARYGIMIQ DVQDVIATAL GGQTVTTTVE GRQRFTVNMR YPRALRSDPQ SIANVLVPMP
GGGAVPLGEV AKIAPTRGPT SIRTEDGQLA SYIYVDIRDR DLGGYVADAQ KAVQASIQFP
PGYYVVWSGQ YEYLERATAR LKIVVPVTLL IIFLLLYLNF RSLTETMIVM LSLPFALVGG
LWLMWALGFN LSVAVAVGFI ALAGVAAETG VVMLIYLNQA LAEIKARRLI EGRALMRTDL
YDAVMEGAVE RVRPKMMTVV AIMAGLLPIM WSTGTGSEIM QRIAVPMIGG MISSTLLTLI
VIPAIFALVK GFRLPNGVNR STTPTTPTMR AARRIPEPAE
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