| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4358 |
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| Symbol | |
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| ID | 4025218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 2019 |
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| End bp | 3437 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964873 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_571781 |
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| Protein GI | 92109494 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCG CCGTCGTCAC CAGCGCCACC GTCGCCGCAT TGATCGCGGC GGCGGGAGGC
GGGTTCGTCG CGGCGCGTTC GCCGTGGTCC GTGGCAGGCG TCACCGGCAT GGTCGCTCCC
GCTGCGGCGG AGGGCGCTCC CACGCCGATC TACTATCAGG ATCCCGACGG CAAACCTTCG
TACTCGCTGA CGCCGAGGAA GACTCCTGAC GGCCGCGACT ATCGCGCCGT CCCGGCGAGC
GCCGACGTCA GTTTCGACAA CGACGCTCCG GAGCCGACGC CCACGGCGTC GGTCGGCGGC
TCCAAAGAGC GACGCATCAA ATACTACCGC AACCCGATGG GGCTCCCCGA CACGTCGCCC
AAACCGAAGA AGGATTCGAT GGGGATGGAC TACATCCCGG TCTATGAGGG CGAGGATTCC
GACGACGGGT CGGTCAAGTT GTCTCCGGGC AAGATCCAGC GCACCGGCGT GAAGTCGGAA
CCCGCAGCAA GGCGGGTGAT TCGGACGATA GTCTGCGCTC CCGGCACCAT CGCGCTCGAC
GAGCGGCGGA TTTCCGTCAT CGCGATGAGG TCCGAAAGCT TTGTCCTGAA GGTCGCCGAC
GTCACGACGG GATCGCACGT CGTCAAGGGC CAGCCGCTGA TGGAGATCTA TAGCCCGTCG
GTTTCGTCCG CCGCCGCTGA GTACCTCACG ACGATCACCT CGAAGACGAC CAGCGGCAAC
GTCCAGTACG GTCGGGGATC GCGGCAGCGT CTGATGAACC TCGACGTTCC GGATGCCGCC
ATTTCAGCCA TCGAGAAGAG CCGAACCGTA CCGACATCGA TCGAGTGGAG CGCACCGCGC
GACGGCATCG TTCTCGAGCG CAACGCGATC GAGGGCATGC GTGTCCAGCC GGGCGGCGTC
CTGTTCAGGA TCGCCGACCA CTCCGTCGTG TGGGCGCTGA TCGACGTTGC CGAACGCGAT
CTCGGCGCCA TCGCCGTCGG CCAGCCGGTC ACAGTCAAAG CGCGGAGCTT TCCCGGGCGG
GAGTTCACCG GAAAGGTCGA CGTGATCTAT CCAGAGATTA ACAAGGAGAC GCGGACGGCA
CGCGTCCGTG TAGAGCTAAA GAATGCCGAC CTGATCCTGC TGCATGACAT GTATGTCGAT
GCCGAGATCA ATACCGGCAG CCCCGAGGCG GTACTGGCGA TTCCGGAGAG CGCCGTGCTC
GACACCGGCG CCCGGCAATC GGTGCTTATC GACAAGGGAC AAGGCCGTTT CGAGCCGCGC
GAGGTCAAGC TCGATCAACG GGGCAACGGT TATGTCGAAG TCCGGTCGGG TGTCGCGGAC
GGGGAGCCGG TTGTCGTTTC CGCGAACTTC TTGATCGATG CGGAGAGCAA TCTCAAGGCG
GCGCTGAAGG GATTCTCTGA AACGGGAGCT CAACCATGA
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| Protein sequence | MNRAVVTSAT VAALIAAAGG GFVAARSPWS VAGVTGMVAP AAAEGAPTPI YYQDPDGKPS
YSLTPRKTPD GRDYRAVPAS ADVSFDNDAP EPTPTASVGG SKERRIKYYR NPMGLPDTSP
KPKKDSMGMD YIPVYEGEDS DDGSVKLSPG KIQRTGVKSE PAARRVIRTI VCAPGTIALD
ERRISVIAMR SESFVLKVAD VTTGSHVVKG QPLMEIYSPS VSSAAAEYLT TITSKTTSGN
VQYGRGSRQR LMNLDVPDAA ISAIEKSRTV PTSIEWSAPR DGIVLERNAI EGMRVQPGGV
LFRIADHSVV WALIDVAERD LGAIAVGQPV TVKARSFPGR EFTGKVDVIY PEINKETRTA
RVRVELKNAD LILLHDMYVD AEINTGSPEA VLAIPESAVL DTGARQSVLI DKGQGRFEPR
EVKLDQRGNG YVEVRSGVAD GEPVVVSANF LIDAESNLKA ALKGFSETGA QP
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