Gene Nham_4323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4323 
Symbol 
ID4025646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand
Start bp265742 
End bp268861 
Gene Length3120 bp 
Protein Length1039 aa 
Translation table11 
GC content68% 
IMG OID637964844 
Producthypothetical protein 
Protein accessionYP_571752 
Protein GI92109464 
COG category[S] Function unknown 
COG ID[COG3002] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATGG TGGATGCATT GAACCTCGGG CGGCGTCTGC GGGTGCGCTC GACCGCCTAC 
GTGGCGGGTG AGCCGGTGCC GTTTTTCTGG CCGATGCGCA CTTTCATTCA CCACAACCCG
CTGTACGGCC TCGAGCACAT GCCTTTCGAG CAGGCGGTGC GCCGCGGCGC GGAGCTGTTC
CACGCGCGCA TGTTCCTGCC GCGCAGCGAC TATCAGCGCT GGCAGCGCGA GGGCAAGGTG
CGGCAGGATA CCCTCGCCGA GGAGATCGCG CGCCGCGCTC AGGCACTGCC CGCCGTGCCG
GGCATCGACT GGCCGCGCTG GCTGCAGGCG CTGATGCAGT CGGCGCACGA CCGCGATGTG
GTGGTGCCGG GCGTGCGGGC GCCGGACGTC CACGCTGCGC TGCACGGCCA GCCGCCGTCC
GCGCAGGCGG TGGACGTGGC CGTGCTGCTG CCCGCGCTCG AGCAGCGCCT GCACGGACTG
ACGCTGCCCG AGGCGGTCGA TGCCCTGTGG GGCACCCGCC TGGCCGACGA GCTCGACGAG
CTGGTGATCA AGAGTTACCT GGATTTTTTT GACGAAGACC AGTCCTCCTG GCGCATGCCC
GGGCGCGAGC GCGGCCTGTT TGCCGCCTGG AGCGAAATCG CGCGGCGCAA TGCGCGCATG
TTCCTGCGCG GGCTGCACGT GCGCCGCACC CTCGGTCGGG TGCAAGACCC CGAAAGCGCG
GTGGTGCACG TCATGGAGGA GATGGGCATC GACCCCGACG CCTGGTCGGC CTACTTCACC
CGCGAGCTCA CCCGGCTGCA CGGCTGGACC GGCTTTGTGC GCTGGCGTTC GTCCGCCAAG
CATTACTACT GGGCGCAGCG CTATCCGGCC GAGGTCGTCG ATCTTCTGGC CGTTCGCTTG
GTGGTGGGAC TGGCGCTGCT GCAGGAAAGC GCGCGCCATC GCCGTACGCC GGTGCGGCGC
GAGCAGCTCG ACGCCTTGCT GCACGAACGC GGTGCGGAAT GCCTGCTGCG CAACGCGCTG
CACAGCGGCG AGGTGTTGCC CGATTGGGCG CAGCGCATCG ACGACACCTT GTCGCGCGGC
GGCAGCAAAC GCTGCGAGGC TCTGCTGCAA CGCTACTGGC CATTGTGGCA AGCCCGCCAG
GGACAGGATC AGGCCGCCGC CTTGCGCGAA CTGGCCGCCG CGGCGGACGC GACCGCGGCG
CTCGAGGTGC TCTCGCCCGA GGATATCGCG GGACTGATCC AGGGGCTGCA GGAGTTTGCG
CGGCAAGAGG GCATGGTCTG GACGCTGGCG ATGGAGGCGC AGGCCATCGA CCAGCTGCTC
GCGCAGGTGC AGGTGCCGCA GGATCTTGCG GCCGGCAAGC GGCCGTTCGC CCAGGCCTGG
TTCTGCATCG ACGTGCGCGC CGAGCCCATC CGCCGCCACC TGGAGCGGGT GGGCGATTAC
CAGACCTTCG GCATTGCCGG ATTCTTCGGC GTGCCCGTAG GCTTCCTCGG CTACGGCAAG
GGCAGCGAGA GCCATTTTTG TCCGGCGGTG GTCACGCCCA AGAACCTGGT GCTGGAGCTG
CCCGCCGAGC TCGATCCTGA AGAGGACGAC CTGCTCAGCA CCCTCGGCCA TGTGCTGCAC
GATCTCAAGA GCTCGGTGCT CTCACCCTAT GTCACGGTGG AGGCGGTGGG CATGCTGTTC
GGGCTGGACC TGTTCGGCAA GACCCTGGCG CCGCTGGGCT ACAGCCGCTG GCGCAACCGC
ATCGATGCCG ACAAACCCGT CACCCGCCTG TTGGTGGACA AGCTCACCCG CGAGCAGGCC
GACTCCATCA TCCGCACCCT GCAGCGCGCG ATGATCGTCA AGGCGCTGCA TGCCGAGCTG
CATATCGAGC GCGAGCGGGT GGATGACGAC ATGATCCGCG AACTGCGCGA AACTGCCTTG
CGCCACCGCG AGGGGCCGAC GCGGCTGCAA AGGACCTTTG GCGTCTCGGA CAAGCAGGAG
GCCGAATTCA TCGACAAGCT GCGCGAGGTC TACCGCGTCG ATGCCGATTA CGCCAGCTAT
CAGCTCGTGC GGCTGGGACG CATCGGCTAC TCGCTCGACG AGCAGGTCAA CTACGTGCAC
ACGGCGTTGA CCATGATCGG GCTGACCAAG ACCTTCTCGC GCTTCGTGCT CATCGTCGGC
CACAGCGGGC AGACCGAGAA CAACCCGTAC GAATCGGCGC TGGACTGCGG CGCCTGCGGC
GGCGCCAGTG GCCTGGTCAA CGCCCGGGTG CTGGCGCAGA TGGCCAACAA GACCGCGGTG
CGCGAGCGGC TGCGTGGCAT GGGCATCGAC ATTCCCGATG ACACCTGGTT CCTGCCGGCG
CTGCACAACA CCACCACCGA CGCCATCGAG CTGTCCGACC TCGTTCTGCT GCCGCCGCGC
CACCTGGTCT ATCTGGATCG TCTGCGCAAC GGCCTGCGCG CCGCGTCCAG GCTAGCCGCG
GCCGAGCGCA TGCCCAAGCT GCTGCCGCAG GCGCGGGCGA TCGAGCCGGC GCAGGCCTGG
CGCCTGGCAC ACCGCCTGGC GGTGGACTGG GCGCAGGTAC GGCCCGAGTG GGGGTTGTCG
AAGAACGTGT ACGGCATCAT CGGCCGGCGC TCGCTTTCAG AGCGTGCCGA TCTGCAGGGG
CGCCCCTTCC TGATGTCGTA CGACTGGCGC TGCGACCCCA AGGGGCGCTT GCTGGAAAAC
CTGCTGGCGG CGGCGGTGGT GGTGGGCCAG TGGATCAACC TCGAACACTT CTTCTCCACC
GTGGACAATG CCCGTCTGGG CAGCGGCAGC AAGGCCTATC ACAATGTGGC CGGGCGCTTC
GGCGTGATGA CGGGCAGTCT GAGCGATCTG CGCACCGGCC TGCCGGCGCA GACGGTGATG
CGCGAGGGCC AGCCCTATCA CGAGCCGATG CGCATGATCG CGCTGATCGA GGCGCCGCTG
GACTTCGCCG GCCGTGCGCT GCAAAGCGTG GTCAAGGTCA AGAGCCTGGT GCTCGGCGGC
TGGATCCGCG CCATCGTCAT CGACCCCACC CAGGGCTACA AGCCTTTCGT CTTCAACAAT
GGCCAGTGGG AGGAGCGTCC GCCTCTGGTC GCTCCTGCCG AAGAGGAACA CGCCGCATGA
 
Protein sequence
MVMVDALNLG RRLRVRSTAY VAGEPVPFFW PMRTFIHHNP LYGLEHMPFE QAVRRGAELF 
HARMFLPRSD YQRWQREGKV RQDTLAEEIA RRAQALPAVP GIDWPRWLQA LMQSAHDRDV
VVPGVRAPDV HAALHGQPPS AQAVDVAVLL PALEQRLHGL TLPEAVDALW GTRLADELDE
LVIKSYLDFF DEDQSSWRMP GRERGLFAAW SEIARRNARM FLRGLHVRRT LGRVQDPESA
VVHVMEEMGI DPDAWSAYFT RELTRLHGWT GFVRWRSSAK HYYWAQRYPA EVVDLLAVRL
VVGLALLQES ARHRRTPVRR EQLDALLHER GAECLLRNAL HSGEVLPDWA QRIDDTLSRG
GSKRCEALLQ RYWPLWQARQ GQDQAAALRE LAAAADATAA LEVLSPEDIA GLIQGLQEFA
RQEGMVWTLA MEAQAIDQLL AQVQVPQDLA AGKRPFAQAW FCIDVRAEPI RRHLERVGDY
QTFGIAGFFG VPVGFLGYGK GSESHFCPAV VTPKNLVLEL PAELDPEEDD LLSTLGHVLH
DLKSSVLSPY VTVEAVGMLF GLDLFGKTLA PLGYSRWRNR IDADKPVTRL LVDKLTREQA
DSIIRTLQRA MIVKALHAEL HIERERVDDD MIRELRETAL RHREGPTRLQ RTFGVSDKQE
AEFIDKLREV YRVDADYASY QLVRLGRIGY SLDEQVNYVH TALTMIGLTK TFSRFVLIVG
HSGQTENNPY ESALDCGACG GASGLVNARV LAQMANKTAV RERLRGMGID IPDDTWFLPA
LHNTTTDAIE LSDLVLLPPR HLVYLDRLRN GLRAASRLAA AERMPKLLPQ ARAIEPAQAW
RLAHRLAVDW AQVRPEWGLS KNVYGIIGRR SLSERADLQG RPFLMSYDWR CDPKGRLLEN
LLAAAVVVGQ WINLEHFFST VDNARLGSGS KAYHNVAGRF GVMTGSLSDL RTGLPAQTVM
REGQPYHEPM RMIALIEAPL DFAGRALQSV VKVKSLVLGG WIRAIVIDPT QGYKPFVFNN
GQWEERPPLV APAEEEHAA