| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4269 |
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| Symbol | |
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| ID | 4025201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | - |
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| Start bp | 218529 |
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| End bp | 220859 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637964799 |
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| Product | hypothetical protein |
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| Protein accession | YP_571707 |
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| Protein GI | 92109419 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.516015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCG TCGCGGAAAT CGCCTGGTGG ATCGAACACG TCGAGGCCGC GCGGCGCGCG
GTCGCTCAGG GACGGGAGGA TCGGCGACGG TCGCGGTCCG CCGCCGCCCT GGACGACGAC
GTGCGCGCCA AGCGAGGGCG TATTGACCCG CTTCCCAAGA TGCCGGCGGC GCAAGCCATC
ATTCGCGGAG CAACGATCAC AGGCAAGCGC GACGAGGAGC GGGCGCGCTC GGTTCCAGTC
GCGAGCGGCG GCAGCGGAGC AGGTGCGCGT TCCTCGGGCC CGTCTGGCGC CGCAGCGAGT
CCGATCTCCG GGGGATTCAG CGCCGGCGCT GCCGGGATGA ACTCCGGCGG CGCCGTCGGC
CGGGCTCGCC AGCTTGCCGC CAGCTATCAG CCTGCCGTCA TCAAGGTGGT GTCTTATGCG
CGTGGCGTCG CGCGCGCCAC CGCGACCGGT CAGTATGTTC AACGGGAGGA CGTCCCGCTC
GAGACCCATG ACGGGCGGAT GTTGATGGAC CGGGAAGCCG TTGCCTATGA AATCAAGGCC
TGGTCGACGG ACTTTTTGAA GCGTGCGGAA AGCCAGGACG TCGGCACTTT CCGTCTGAAG
CTTGAAGGTG TTCCAGATAC CGCCGAAGGC CGGGCGACGT ACGAGAAGGC GATCGCGGCC
GCCTTCTCGG GACATCGCCA CGCCGCTCGC GTTGACGTCG ACGACAAGGG CGCGCTGGAG
GCGCGCGTTG TCGCCGCCAT GGCCGGGACC GGCAAGGAAC GGTTTCGCAT CAGAGAGGCC
CAGGCCGCCG ATCGGGATCA TGACGCTAGA CCACGCCGTC TCGATTCCGT TTCCGATGCC
GCTGTTCGCG CCAGGATTGA AACGGTCCCG GGCGTTGATG GGGAGGCTGT GGCTATTCGG
CCGGGGCCTA CCAGCCATGG TCGCGACGGT GTCACCTACA GGCTCAACAA GCTGATCGAG
AAAGGCACAG CAATCGACGA TCGCGGCAAG AGTCTGTCGA ACGTGTCGGA TGCGCGGATC
GCCGCACGGG AATGGGGGCC GTCGCTTCGG TCGCAATCCG CGCGCGATAC GATGCACCTG
ATCATTTCGG CGAAGGCCGG AACCGATGTG GCCGCCTTGA CCGATGCTGC GCGCGCGTTC
CTGCACGATC GCTTTGCCGA TCATAAGTTT ATGTTCGGCG TTCACACGGA GAAGGAATCG
GCCGGGCATA TCCACGCTCA CGCCGTTATT ACCGTGAAGA ACGAGTCCGG CCAAAAGATC
CATCCCAATC GGGACACGTT CGCGGAGTGG CGCCAAGTGT ATGCGCAGCA CGCTCAGGCG
CAAGGCTTGA AGATCGTCGC GACCTCGGCG AAAGAGCGAG CCTCGTCGCA AAGCTACGGT
CCGAAAGACA AGGCGATCGT GGAGGCGGCG GATCGGCCGC GTCCCGCACG AGAAGCCCGC
GATCGCGCCT ATGCCGCCGA TCCCCTTAAT CAACGCCTCA TCGACAATGC GCGGCAGCGG
ATCCGGGTGG CGAGGACCAA TCCCATTCGC CTGCCCATGT CAGCGCCCGA TCGTAAGGTG
GTGAACGAGA GCATCATCGC CTGGAAGACG GTTGCGGTGG AGCAGCCATC GAACAGGATG
GCAAAGGATA TGCTTGAGCG GCTGTTGATG GCGCAAACTG TCGGAGCCAT TCTTCACACC
ATCGTCAGGC GCGTGGAGTC TTTGACCAAG GAGGGCGAAA TGCCAATGAC GTCGGAACAG
ATGGTCCAAG ATCTGCGGCT CATGAACGAT GCGGTTTCGC GGACCAGCGA CCTGTTGGAT
GGGGAGACGA AGCAGCAATT TCGAGAGACA TCGGCACGCT ATTTGGAAAC ACTCGCCAAT
CGCATTGATC TCCAGCGCAT ACAGGAACGC GGCGTCCAGC AGCTCAGCCG GGCGGAGGTC
GCAGCCATAG TTGGCGTGAA CGCCGAGCGG CTCGTCGAGC GAGCGCAAGA AATTCAGATC
AGGGGAGAGC GCGAGGCAAC TTCGGCGGAG CGCCTTGCAG ACCGGGCAAT CGACGCCGAA
CGGCGGCAAG AGGCCCGCGG TGGCATCGAC CCAGCCTCCC AGGAGGAGCT CAGGGCCGAA
AGGGCAAACG TCGTTGGTTC GCAACAATCG GCAGCGCGTG AAGCTCGCGA GGCAGCCGCC
GCCATTGAAG CCGCACAAGC GATCGCTGAG CACCCGGCAC AGCCTTTGCC AAGAGCTTCG
ATCCAGACCG ATGCCTTGGC AAAGCTTCGC GCGGAACAGG AAAAAATTGT GCACGAACTA
GAAAATGAAA AATCAAATGT TCAATCAATC AGAGGCCATA GGCACCGCTG A
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| Protein sequence | MNRVAEIAWW IEHVEAARRA VAQGREDRRR SRSAAALDDD VRAKRGRIDP LPKMPAAQAI
IRGATITGKR DEERARSVPV ASGGSGAGAR SSGPSGAAAS PISGGFSAGA AGMNSGGAVG
RARQLAASYQ PAVIKVVSYA RGVARATATG QYVQREDVPL ETHDGRMLMD REAVAYEIKA
WSTDFLKRAE SQDVGTFRLK LEGVPDTAEG RATYEKAIAA AFSGHRHAAR VDVDDKGALE
ARVVAAMAGT GKERFRIREA QAADRDHDAR PRRLDSVSDA AVRARIETVP GVDGEAVAIR
PGPTSHGRDG VTYRLNKLIE KGTAIDDRGK SLSNVSDARI AAREWGPSLR SQSARDTMHL
IISAKAGTDV AALTDAARAF LHDRFADHKF MFGVHTEKES AGHIHAHAVI TVKNESGQKI
HPNRDTFAEW RQVYAQHAQA QGLKIVATSA KERASSQSYG PKDKAIVEAA DRPRPAREAR
DRAYAADPLN QRLIDNARQR IRVARTNPIR LPMSAPDRKV VNESIIAWKT VAVEQPSNRM
AKDMLERLLM AQTVGAILHT IVRRVESLTK EGEMPMTSEQ MVQDLRLMND AVSRTSDLLD
GETKQQFRET SARYLETLAN RIDLQRIQER GVQQLSRAEV AAIVGVNAER LVERAQEIQI
RGEREATSAE RLADRAIDAE RRQEARGGID PASQEELRAE RANVVGSQQS AAREAREAAA
AIEAAQAIAE HPAQPLPRAS IQTDALAKLR AEQEKIVHEL ENEKSNVQSI RGHRHR
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