| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4244 |
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| Symbol | |
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| ID | 4025743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | + |
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| Start bp | 194641 |
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| End bp | 196407 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637964781 |
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| Product | putative gluconate dehydrogenase |
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| Protein accession | YP_571689 |
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| Protein GI | 92109401 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.659751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCCC AAGAGCTGAA GGAGCAGGCC ATGGCGAAGA AGCTTCCCGC GGTCGACGTA
CTGCTCGTCG ACTTCGGCTG GACCGGCGCT ATCATGGGCC AGGAATTGAC GGACGCCGGC
CTGCAGGTTC TAGCCCTCGA GCGCGGTGCC TGGCGCGACA CCCCAACGGA CTTCGCGACG
ACCTTCATCC AGGACGAGTT GCGCTTCTAT TATCGATACG AGCTGTTTCA GGAGCCGGCC
CGGGAAACTC TCGCCTTCCG CAACAACACA GGCGAGACCG CCCTGCCGAT GCGTCACCTG
GGCTCGTTCT TGCCGGCAGC CGGCGTGGGT GGCGCAGGCA TTCACTGGAA CGGCCAGAAC
TGGCGCTTCC TGCCGACCGA TTTCACGGTC CGCAGCCAGA CGACGCAGCG CTACGGAGCG
CAGATGATCC CGGGGGACAT GACCATCCAG GACTGGGGAG TTACCTACGA CGAGTTGGAG
CCTTATTACG ACAAGTGGGA ATATCTCTGC GGAATCTCGG GGAAAGCCGG TAACATCAAG
GGGCAGATCC AGCCCGGCGG CAATCCGTTC GAGGGGCCGC GTTCGCGCGA TTTCCCGAAT
CCGCCGATGG AGATGAGCTA CGCACCGGTG CTATTTGCCC AGGCCGCGAA GGAAATGGGT
CTCTACCCAT TCCCTGCGCC AGCCGCCAAC ATGTCGCGCG CCTACACGAA CCCGCTCGGC
GTGCAGCTCG GACCATGCAC CTACTGCGGA TTCTGCGAGA AGTTTGCGTG CGGCAATTAC
TCCAGGTCGA GCCCTCAGAC CACGATCTTG CCCGTGCTGA TGCGCAAGCC GAATTTCACG
CTCAAGACCG ACAGCGAAGT CATCAAGATC AATCTCGATA GCTCGGGAAA GCGCGCTGTC
AGCGTGACCT ATGTCGACTT GCAGGGCGAG GAGTATGAGC AGCCGGCCGA TCTCATCATC
ATGACGGCCT TCATCCTGCA CAATGTGCAT CTCTTGCTAG TGTCTGCGAT CGGCATGCCG
TACGACCCAG CCACCGGCAA GGGCACGCTG GGCAAGAACT ACGCCTACCA GATCGTTTCC
GGCGTCGATG TCTTTTACGA CGACAAGCTC CTCAACCTGT TCATCGGCGC CGGCGCGCTC
GGCATGATCG TGGACGATTT CAACGGCGAC AACTTCGACC ACTCGAAGTT AGGGTTCATT
GGCGGCGGCT ATCTCGCTTG CTGGACCACG AACGGCCGTC CCATCGAGAC CGATCTGACA
CCGAAGGGCA CGCCGAAGTG GGGCGCGAAA TGGAAGAAGG CGGTGGTCGA CAACTACCTT
AAGTCCATAT CCCTCGCCAC TCATGGAGCG GTGATGAGCT ACCGCGGCAA CTATCTCGAC
CTCGATCCCA CTTATCGCGA TTTTCTCGGA CGTCCGCTGA TGCGGATGAC CTTCGACTAC
ACGGACAACG AGCACAAGAT GTCGGATTTC CTGACGCAAA AGACCGCCGA CATTGCCAAA
GCAATGAAGC CGCGAGAATT CCATGCCAAA CCGCGCGAGG GTCATTACGA CATCACGCCC
TATCAAACGA CGCATAACAC CGGCGGTGCG ATCATGGGGG CAAACCCGCA AGAGAGTGTG
GTCAACCGCT ACCTGCAGCA CTGGGACGTT TCTAATCTCT TCGTGATGGG ATCAAGTGCC
TTCCCGCAGA ATCCCGGTAC AACCCGACCG GAACGGTCGG CGCCCTCGCC TATTGGGCGG
CCAATGCGAT CAGGACGAAG TACCTGA
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| Protein sequence | MESQELKEQA MAKKLPAVDV LLVDFGWTGA IMGQELTDAG LQVLALERGA WRDTPTDFAT
TFIQDELRFY YRYELFQEPA RETLAFRNNT GETALPMRHL GSFLPAAGVG GAGIHWNGQN
WRFLPTDFTV RSQTTQRYGA QMIPGDMTIQ DWGVTYDELE PYYDKWEYLC GISGKAGNIK
GQIQPGGNPF EGPRSRDFPN PPMEMSYAPV LFAQAAKEMG LYPFPAPAAN MSRAYTNPLG
VQLGPCTYCG FCEKFACGNY SRSSPQTTIL PVLMRKPNFT LKTDSEVIKI NLDSSGKRAV
SVTYVDLQGE EYEQPADLII MTAFILHNVH LLLVSAIGMP YDPATGKGTL GKNYAYQIVS
GVDVFYDDKL LNLFIGAGAL GMIVDDFNGD NFDHSKLGFI GGGYLACWTT NGRPIETDLT
PKGTPKWGAK WKKAVVDNYL KSISLATHGA VMSYRGNYLD LDPTYRDFLG RPLMRMTFDY
TDNEHKMSDF LTQKTADIAK AMKPREFHAK PREGHYDITP YQTTHNTGGA IMGANPQESV
VNRYLQHWDV SNLFVMGSSA FPQNPGTTRP ERSAPSPIGR PMRSGRST
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