Gene Nham_4232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4232 
Symbol 
ID4025711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand+ 
Start bp186158 
End bp186760 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content62% 
IMG OID637964771 
Productcupin 2, barrel 
Protein accessionYP_571679 
Protein GI92109391 
COG category[S] Function unknown 
COG ID[COG4297] Uncharacterized protein containing double-stranded beta helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.138128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCG TTGAAGATCT CAAGGAGTAT GCGGAGCGCG CCACCGGACT GCGGCGACCG 
GGCAAGCGTG CAGTTGCAAA CTTCGTGCGG CAACGCAACC CGCACGGCGT CCGCTTCAGA 
GATGACGGTC TGGTGCCCAA TCATCCTCGT TGGCCGTTAA TCCTCTATCG AGGCGCGGTC 
CACTTTGACG AGCGCCTCGA TCCGGCGGCC GTGTTCGAAG ACTTATTCGA AGCCAATGGA 
TGGGGCGATA CCTGGCGCAA CGGCATCTAC GATTATGTGC ATTACCACTC CCGGATCCAT 
GAGGCGCTGG GGATCGCGCG CGGCAAAGCT CGGGTCCGTT TCGGTGGCAA AACCGGCCGG 
ACCTTCGCGT TAAAAGCGGG AGATGTCGCG GTGCTGCCCG CCGGGACGGG CCACCGCAGT 
CTCTCCGCCT CCGCGGATTT CCTAGTCGTT GGGGCTTATC CACCGACGGG AACGTACGAC 
GTTTGCACGA GCATCGAAGA CCGTGCCCGC GCTCTCGGGA ACATTCCCAG GGTATTGCCA 
CGCAAGGATC CGGTCTACGG AAAGGAAGGA CCACTATCGA AGCTCTGGAG GCGGCCGAAA 
TGA
 
Protein sequence
MPIVEDLKEY AERATGLRRP GKRAVANFVR QRNPHGVRFR DDGLVPNHPR WPLILYRGAV 
HFDERLDPAA VFEDLFEANG WGDTWRNGIY DYVHYHSRIH EALGIARGKA RVRFGGKTGR 
TFALKAGDVA VLPAGTGHRS LSASADFLVV GAYPPTGTYD VCTSIEDRAR ALGNIPRVLP 
RKDPVYGKEG PLSKLWRRPK