Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4216 |
Symbol | |
ID | 4025544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | - |
Start bp | 172266 |
End bp | 172634 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637964759 |
Product | IS5 family transposase OrfA |
Protein accession | YP_571667 |
Protein GI | 92109379 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATC TGTTTTTGCT GTCGGAGGCG CAGATGCGCC GGATCGAACC GTATTTTCCG TTGTCGCACG GAGTTGCGAG GGTTGATGAT CGGCTAGTGA TCAGCGGCAT CGTCTTCGTT ATCAGGAACG GGCTGCGCTG GCGCGATGCG CCGCGTGAGT ACGGCCCGCA CAAGACCATC TACAATCGGT TCGTGCGCTG GAGCCGACTT GGCGTGTTCA ACAAAATCTT CGCGGAACTG GCCCGCAAGG CCGGCAAACC ATCCCGATTG ATGATCGATG CGACTCATCT GAAGGCGCAC CGTACCGCTG CGAGCCTTTT AAAAAAGGGC CTGTTCCCCG ACGTATCGGG CGCACCAAGG GCGGTTTGA
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Protein sequence | MADLFLLSEA QMRRIEPYFP LSHGVARVDD RLVISGIVFV IRNGLRWRDA PREYGPHKTI YNRFVRWSRL GVFNKIFAEL ARKAGKPSRL MIDATHLKAH RTAASLLKKG LFPDVSGAPR AV
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