Gene Nham_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4216 
Symbol 
ID4025544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand
Start bp172266 
End bp172634 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content59% 
IMG OID637964759 
ProductIS5 family transposase OrfA 
Protein accessionYP_571667 
Protein GI92109379 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC TGTTTTTGCT GTCGGAGGCG CAGATGCGCC GGATCGAACC GTATTTTCCG 
TTGTCGCACG GAGTTGCGAG GGTTGATGAT CGGCTAGTGA TCAGCGGCAT CGTCTTCGTT
ATCAGGAACG GGCTGCGCTG GCGCGATGCG CCGCGTGAGT ACGGCCCGCA CAAGACCATC
TACAATCGGT TCGTGCGCTG GAGCCGACTT GGCGTGTTCA ACAAAATCTT CGCGGAACTG
GCCCGCAAGG CCGGCAAACC ATCCCGATTG ATGATCGATG CGACTCATCT GAAGGCGCAC
CGTACCGCTG CGAGCCTTTT AAAAAAGGGC CTGTTCCCCG ACGTATCGGG CGCACCAAGG
GCGGTTTGA
 
Protein sequence
MADLFLLSEA QMRRIEPYFP LSHGVARVDD RLVISGIVFV IRNGLRWRDA PREYGPHKTI 
YNRFVRWSRL GVFNKIFAEL ARKAGKPSRL MIDATHLKAH RTAASLLKKG LFPDVSGAPR
AV