Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4212 |
Symbol | |
ID | 4025540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | + |
Start bp | 168852 |
End bp | 169757 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637964755 |
Product | integrase catalytic subunit |
Protein accession | YP_571663 |
Protein GI | 92109375 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.955324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCCT TCATCAGCGG TCATCGCGAG GCGCACGGGG TCGAGCCGAT CTGCAAGGTC TTGCCGATCG CCCCCTCGAC CTATTACGCC GATGTGGCCA GACGGCGCGA CCCGGCCAGG CTGTCGGCAC GCGCCAGGCA GGATGCCGCC ATGAAGATCG AGGTTCGACG CGTGTTCGAT GAGAACTTCC GGATGTATGG CGTGCGCAAG GTCTGGCGGC AGCTCAAACG CGACGGCTTC GATATTGCTC GTTGCGCGGT GTCGCGATTG ATGCGCGACA TGGGCTTGCA GGGAGCCATC CGCGGCAAAT CCGTGAGAAC CACGATGAGC GACAAAGCCG CGCCATGCCC GCTGGATCAC GTCAATCGCC AGTTCAAGGC GCCTCGGCCG AATGTCCTGT GGCTCTCCGA CTTCACCTAT GTCGCGACCT GGACCGGCTT CGTCTACGTC GCCTTCGTCA TCGACGCCTA TGCCCGCAGG ATCGTGGGTT GGCGAGCGTC GCGCACGGCG CACGCCGGCT TCGTGCTCGA TGCGCTGGAG CAGGCCCTGC ATGATCGGCG GCCGGTCCAT CGCGGCGGGC TCGTGCACCA CAGCGACAGG GGCAGCCAAT ACGTATCCAT CAGGTACACC GAGTGCCTGA CTGAGGCTGG CATCGAGCCG TCGGTCGGCA GTGTCGGAGA TTCCTATGAC AACGCTCTCG CCGAAACCAT CAACGGTCTC TACAAGGCCG AAGTGATCCA TCGGCGCGGA CCGTGGCGCA GCTTCGAGGC CGTCGAGTTC GCCACTCTCG AATGGATCGA CTGGTTCAAC AACCGAAGGC TGCTGGAGCC CATCGGCAAC ATCCCGCCGG CCGAAGCCGA GCAACGCTAC TACGCTATGC TGGAGCAACC AGGCATGGCG GCGTAA
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Protein sequence | MIAFISGHRE AHGVEPICKV LPIAPSTYYA DVARRRDPAR LSARARQDAA MKIEVRRVFD ENFRMYGVRK VWRQLKRDGF DIARCAVSRL MRDMGLQGAI RGKSVRTTMS DKAAPCPLDH VNRQFKAPRP NVLWLSDFTY VATWTGFVYV AFVIDAYARR IVGWRASRTA HAGFVLDALE QALHDRRPVH RGGLVHHSDR GSQYVSIRYT ECLTEAGIEP SVGSVGDSYD NALAETINGL YKAEVIHRRG PWRSFEAVEF ATLEWIDWFN NRRLLEPIGN IPPAEAEQRY YAMLEQPGMA A
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