Gene Nham_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4212 
Symbol 
ID4025540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand
Start bp168852 
End bp169757 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content64% 
IMG OID637964755 
Productintegrase catalytic subunit 
Protein accessionYP_571663 
Protein GI92109375 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.955324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCCT TCATCAGCGG TCATCGCGAG GCGCACGGGG TCGAGCCGAT CTGCAAGGTC 
TTGCCGATCG CCCCCTCGAC CTATTACGCC GATGTGGCCA GACGGCGCGA CCCGGCCAGG
CTGTCGGCAC GCGCCAGGCA GGATGCCGCC ATGAAGATCG AGGTTCGACG CGTGTTCGAT
GAGAACTTCC GGATGTATGG CGTGCGCAAG GTCTGGCGGC AGCTCAAACG CGACGGCTTC
GATATTGCTC GTTGCGCGGT GTCGCGATTG ATGCGCGACA TGGGCTTGCA GGGAGCCATC
CGCGGCAAAT CCGTGAGAAC CACGATGAGC GACAAAGCCG CGCCATGCCC GCTGGATCAC
GTCAATCGCC AGTTCAAGGC GCCTCGGCCG AATGTCCTGT GGCTCTCCGA CTTCACCTAT
GTCGCGACCT GGACCGGCTT CGTCTACGTC GCCTTCGTCA TCGACGCCTA TGCCCGCAGG
ATCGTGGGTT GGCGAGCGTC GCGCACGGCG CACGCCGGCT TCGTGCTCGA TGCGCTGGAG
CAGGCCCTGC ATGATCGGCG GCCGGTCCAT CGCGGCGGGC TCGTGCACCA CAGCGACAGG
GGCAGCCAAT ACGTATCCAT CAGGTACACC GAGTGCCTGA CTGAGGCTGG CATCGAGCCG
TCGGTCGGCA GTGTCGGAGA TTCCTATGAC AACGCTCTCG CCGAAACCAT CAACGGTCTC
TACAAGGCCG AAGTGATCCA TCGGCGCGGA CCGTGGCGCA GCTTCGAGGC CGTCGAGTTC
GCCACTCTCG AATGGATCGA CTGGTTCAAC AACCGAAGGC TGCTGGAGCC CATCGGCAAC
ATCCCGCCGG CCGAAGCCGA GCAACGCTAC TACGCTATGC TGGAGCAACC AGGCATGGCG
GCGTAA
 
Protein sequence
MIAFISGHRE AHGVEPICKV LPIAPSTYYA DVARRRDPAR LSARARQDAA MKIEVRRVFD 
ENFRMYGVRK VWRQLKRDGF DIARCAVSRL MRDMGLQGAI RGKSVRTTMS DKAAPCPLDH
VNRQFKAPRP NVLWLSDFTY VATWTGFVYV AFVIDAYARR IVGWRASRTA HAGFVLDALE
QALHDRRPVH RGGLVHHSDR GSQYVSIRYT ECLTEAGIEP SVGSVGDSYD NALAETINGL
YKAEVIHRRG PWRSFEAVEF ATLEWIDWFN NRRLLEPIGN IPPAEAEQRY YAMLEQPGMA
A