Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4194 |
Symbol | |
ID | 4025634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | + |
Start bp | 153030 |
End bp | 154676 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637964741 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_571649 |
Protein GI | 92109361 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAGATG ATCCCTTCGC CGCTCCGCGC GCCGCCCATG GCCGCGCCCC CGATGTGTTC CGTCCCGGCG GATGGATTCC GATGCGACAG CACCGGCAAG ACGAGCCCGT CGACTTTGTC ATCGTCGGCA CCGGCGCCGG CGGCGGCACG CTCGCTTGCC GCCTTGCCGA GCACGGCTTC TCCGTCGTTG CCATGGATGC GGGACCGTAT TTCCGGCCAC TCGAGGATTT CGCATCGGAC GAGTCGGAGC AGACCAAATT GTATTGGACC GATGACCGCA TCGTCGACGG AGCCAATCCG CTCCAGATGG GCGGCAACAA CAGCGGCAAA GCCGTCGGCG GATCCACCGT GCACTTCGCG ATGGTCTCGC TCCGGTTCCG TCCGGCATGG TTCAAATCGC GCAGCCTGCT CGGCTATGGC GCTGACTGGC CACTCGATTG GCGCGAGATG TGGCACTATT ACAGCGAGGT CGAGGACGCA TTGAAGATCG CCGGCCCGGT CAGCTATCCC TGGGGGCCGC GCCGGCCACG ATATCCCTAC CGGGCCCACG AGCTCAATGC CGCCGCACGC GCGCTCGCCG ACGGTTGCGA AGCATTGGGA ATCAAATGGA CGGAAACGCC TATCGCCACG CTTTCGGCAC CACGCGGATT GGCGCATCCG TGCGTGTATC GCGGATTTTG CACGTCGGGT TGCGCGACCA ACGCCAAGCA AAGCGCGCTG GTGACCTGGA TTCCGCGCGC CATCGCAGCC GGCGCCGAAA TCCGCGATCT CGCAATGGTC GGCAGGATCG AAACGGACAA TTCAGCCGTA GCGACCGGCG TGCACTACTA TCGCGACGGC CAGTGGCGTT TTCAGCGCGC GCGCAATGTC GTCGTCGCAG GCTATGCGAT CGAAACGCCG CGACTGCTGC TGAATTCCGC GACCGGTCGT TTCCCCGACG GACTCGCCAA CGGCTCCGGT CTGGTCGGCA AGAATCTGAT GGTGCAGTCG AACCAGGCCG TCTGGGGCAC GATGGAGAGG GAAGTGCGCT CCTACAAGGG GCCGCCGTCC CTCGCCATCA CCGAACACTG GAACTACGAG GATAAGGGCA AGGACTTCTT CGGCGGCTAT TGCTACATGA GCCAGGGCCC GCTGCCGCAG TTGTGGGCCA ACACCCTCAT GAGCGCCCGC GGCCTTTGGG GAGCGCGGCT GATCGAAGAA ATGGAGAAGT ACAATCACGT CGTCGGTCTC AAGATCGTCG GCGAAATGTT GCCGCAGGAG ACCAATCGCG TCACGCTTGC CGACGAGACC GATCAATACG GACTGCGGAT CCCGCGCATC ACCTACGCGT GGTGCGACAA CGACCGGCGC CTGATCGATC ACTCCCTCGC GTTCATGACC CAGGCGCTCG AGGCCGTCGA CGCAACCGAC CTCTGGCGTC AGAATGACGA CACCTGTCAT TTGAACGGCG CGGCGAGGAT GGGAGATGAT CCGTTCACCA GCGTCGTCAA TGCCGATTGT CGAAGCTGGG ACGTTCGCAA CCTCTGGATC TGCGACGGGT CGGTCTTTCC CACCGTCGGC GGCGTCAATC CCTCCCTGAC AATCCAGGCG ATCGCCTGTC GGACGGCCGA CCGGATCAAG ACCATGGCCG GCCGAGGCGA ACTTTAG
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Protein sequence | MSDDPFAAPR AAHGRAPDVF RPGGWIPMRQ HRQDEPVDFV IVGTGAGGGT LACRLAEHGF SVVAMDAGPY FRPLEDFASD ESEQTKLYWT DDRIVDGANP LQMGGNNSGK AVGGSTVHFA MVSLRFRPAW FKSRSLLGYG ADWPLDWREM WHYYSEVEDA LKIAGPVSYP WGPRRPRYPY RAHELNAAAR ALADGCEALG IKWTETPIAT LSAPRGLAHP CVYRGFCTSG CATNAKQSAL VTWIPRAIAA GAEIRDLAMV GRIETDNSAV ATGVHYYRDG QWRFQRARNV VVAGYAIETP RLLLNSATGR FPDGLANGSG LVGKNLMVQS NQAVWGTMER EVRSYKGPPS LAITEHWNYE DKGKDFFGGY CYMSQGPLPQ LWANTLMSAR GLWGARLIEE MEKYNHVVGL KIVGEMLPQE TNRVTLADET DQYGLRIPRI TYAWCDNDRR LIDHSLAFMT QALEAVDATD LWRQNDDTCH LNGAARMGDD PFTSVVNADC RSWDVRNLWI CDGSVFPTVG GVNPSLTIQA IACRTADRIK TMAGRGEL
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