| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4175 |
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| Symbol | |
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| ID | 4025561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | - |
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| Start bp | 133078 |
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| End bp | 134859 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637964722 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_571630 |
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| Protein GI | 92109342 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0491982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGTG ATTGCGAAGC TGCGGCCTTT ATTGCACGAA ACGGATCGAT CGACTGGCTG
TGTCTGCCGC GCTTCGATTC CGATAGCTGT TTTGCGGCGC TGCTCGGTGA GCCAAAGGAC
GGCCGATGGC AGATCGCTCC GCGAGCGCCG TCCGAAGTCA CTGACAGGCG ATATCGTGAG
GGCACGCTCA TCCTCGAGAC CACCTTCACG AATGCCGAAG GAAGTGTCCG CCTGATCGAT
TTCATGCCGC CAAAAGGCCA AGCGTCCGAC GTGATACGAA TTGTGGTCGG TATTGAAGGC
CGCGTCAGAA TGCGAAGCGA ACTCGTGATC CGTTTCGATT ATGGTCGCGC GATCCCTTGG
GTCAGCCGAT TAGAAAATGG TGTCCTGCGT GCCACTGCCG GACCAAACAT GCTTCTGCTC
CGCACGCCGG TTTCCGTTCG CGGCAAAGAC ATGAAAACCA TCGGCGACTT TACGGTGGCG
GCCGGTGACC GGGTGCCCTT CGTCTTGACC CATGCGCCCT CCTATTTGCC AGTTCCGGCA
TTGCCGGATC CTTTCAGCGC ACTTGCCAAC ACCGAACAGT TCTGGCGCAA GTGGTCATCC
ACTTACCAGG GAACTAGCAA GTGGTCGGAA GCAGCTCTGC GTTCGCTGAT CACGCTAAAG
GCGCTGACCT TTTCACCGAC CGGCGGCATT GTAGCGGCGC CGACGACCTC GTTGCCGGAA
AAGATCGGCG CCAGCCGCAA CTGGGATTAC CGGTTTTGCT GGCTGCGCGA TGCGACGCTC
ACTTTGCTGG CGTTGATGGG CTCGGGATAC TTTCAGGAGG CCAGCGCCTG GCGTGACTGG
CTAGTCCGGG CGGTCGCCGG CAACCCCAAT CAGCTCCAGA TTATGTACGG CGTGGCGGGC
GAGCGGCGGC TGTGGGAATG GGAGGTGCCG TGGCTGCGCG GTTTCGGAGA TTCAAAGCCC
GTGCGCGTCG GCAATGCCGC TCACGACCAG TTGCAACTTG ATGTATTCGG CGAGCTAATG
GATGCGCTTT ATCAGGCGCG GCGCGGCGGT CTTCCGGCGA GCGAACCGAC TTGGGACATG
GAGTGTGCCC TCCTTCAATA CTTGGCTTCG ATCTGGCAAC AGCCTGACTC TGGCATTTGG
GAAATTCGCG GTGAACCCCG TCATTTCACA TATTCGAAGA TGATGGCGTG GGTTGCGTTC
GACCGAGGAA TCAAGAGCTC GCAAGAATTC GATCTTCCGT GTCCTGTCGA GGACTGGCGT
CGCATCCGGG ATGATATTCA CCGTGACGTT TGCGCTAACG GGTGTGATCC CGATCTGGGA
CATTTCGTTC AAGCCTATGG CGGCAAGGAG CTGGATGCCA GCCTTCTGCT AATGTGCTCG
ATAGGCTTTC TGCCGCCGAC GGATCGTCGC GTGCGTGCCA CTGTCGAAGC CATCGAGCGG
GACTTGCTGG TTGATGGTTT TGTTCGGCGT TACGACACCG GTCGAACTGA TGACGGCCTT
CCGCCGGGGG AAGGCATGTT CCTGGCATGC AGCTTCTGGC TTGCCGACGC CTACCAGATG
TTGGGGCGTA TTGCGGATGC TGAGGCATTA TTCGAACGGT TGCTCGCCCT CCGTAATGAC
CTTGGCTTGC TGTCGGAGGA ATACGACCCC GATCATCGCT GCCTGGTCGG AAATTTTCCC
CAGGCGTTTT CACATATTTC GCTTATCAAT ACCGCACACA ACCTCTCGCA GGCCGAGAAG
TCGTTGAATC AACGATCCGA GAAGAAAGCC GCATCCGATT GA
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| Protein sequence | MIGDCEAAAF IARNGSIDWL CLPRFDSDSC FAALLGEPKD GRWQIAPRAP SEVTDRRYRE
GTLILETTFT NAEGSVRLID FMPPKGQASD VIRIVVGIEG RVRMRSELVI RFDYGRAIPW
VSRLENGVLR ATAGPNMLLL RTPVSVRGKD MKTIGDFTVA AGDRVPFVLT HAPSYLPVPA
LPDPFSALAN TEQFWRKWSS TYQGTSKWSE AALRSLITLK ALTFSPTGGI VAAPTTSLPE
KIGASRNWDY RFCWLRDATL TLLALMGSGY FQEASAWRDW LVRAVAGNPN QLQIMYGVAG
ERRLWEWEVP WLRGFGDSKP VRVGNAAHDQ LQLDVFGELM DALYQARRGG LPASEPTWDM
ECALLQYLAS IWQQPDSGIW EIRGEPRHFT YSKMMAWVAF DRGIKSSQEF DLPCPVEDWR
RIRDDIHRDV CANGCDPDLG HFVQAYGGKE LDASLLLMCS IGFLPPTDRR VRATVEAIER
DLLVDGFVRR YDTGRTDDGL PPGEGMFLAC SFWLADAYQM LGRIADAEAL FERLLALRND
LGLLSEEYDP DHRCLVGNFP QAFSHISLIN TAHNLSQAEK SLNQRSEKKA ASD
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