| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4174 |
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| Symbol | |
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| ID | 4025560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | - |
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| Start bp | 130521 |
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| End bp | 132710 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637964721 |
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| Product | hypothetical protein |
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| Protein accession | YP_571629 |
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| Protein GI | 92109341 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.121441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTCA AGGTTCAGGT AGGTCCGGCG CAGATCGCCA TTCATCAGGG GCAGACAGTG
CTGGTGACCG AGCCGGATGG ACAGATAAAC TGGCCCAGCA AGCGCGGGTT GTATTTCCGC
GACACCAGGG TCATCAGTGC CTGGGGAATC TATGCCAACG GCGAGCGCTG GGAGCTGTTG
AACGGCGGCG GCGCTGCGCC GCACGTGGCA CGCGTTTTAC TCACCAATCG CGGCTTTGTG
ACAAAAGACG GGCCGATCGC GGCGCGGACG CTGGGTCTTG TGATCGGCCG TCATATCGAT
GGCGGCCTGC ACGAAGATCT CGACATCACC AATAACAGTC AGAAGCCGGT TCGTTTCAAC
CTCGAGATCG CAATCCGGGC TGATTTCGCC GACGTCTTCG AGGTGAAGGG CGACAATATC
GTACGCCGCG GCCGCACCGT CACCTCCTGG TCGGCGAAGC GAGGGATCCT TCGCATCACC
TACCGCAACA AGGACTTTTG CCGCGAAGTC ATGGTCCGCA CTGGCGAGGG AGACGGCGAG
CCGGCGGTGA ATGCCAACGG GCGCCTGAGC TTCGATGTCA TTCTGAAAGC CGGGCAAGCC
TGGCATCGCT GCCTGATCTA CGACCTGGTG GACGGCACGA AACACATCCG GGCGCCGCGG
AAATGCAGTC ATTCCGGCAC GACATCGGAA CATGCCGGAA ACATGGACAA ATGGCGGCGG
ACGGTTCTGA AAATCGACAC CAGCAACGAG GAATTCTACC GCTGTTTCAG TCAAGGCGTG
CAGGACATGG CCGCCTTGCG CTTACCACTA AAAGACACGG ATCACATGGT GTTCGTTCCC
GCTGCCGGGT TGCCATGGTT CGTGGCGCTG TTCGGCCGCG ACACCCTTAT AGTCTCGCTG
CAGACGATGA TCGTCTATCC GGAATTCGCC GCCGGGACGC TCGAGATTCT GGCGCAATAT
CAAGCGACGC AGCGCGACGA CTACCGCGAC GCTGAGCCGG GCAAAATCCT GCACGAGCTT
CGTTATGGCG AACTCGCGCA TTTCAAGTTG ATCCCGCACA CGCCGTACTA CGGCACGGCG
GACGCAACGC CCCTCTATCT GATCGCGCTG CATGGAGCGT GGCGAGCCAG CGGCGACCGC
GCGTTGATCG AACGGTACCT GCCAAATGCC GAAGCCTGCC TGACCTGGAT CGACAAATAC
GGTGATCGCG ACGGCGATGG TTTTCAGGAA TATCAGACAC GCTCGCCAGC CGGCTACGAG
AACATGGCTT GGAAGGATTC CGGCGACGCG GTGATGTATC CCGACGGCAC GCTGGTGCGC
GGGCCGAAGG CCCTGTGTGA GTTGCAGGGC TACGTCTACG ACGCATGGCT GCGCATGGCC
GAGATCTACG ACGAACTGGA CAACAAGCGG CGTGCCAACG CGCTACGCAA GAAGGCGGCA
GTGCTGTTCA GGAAGTTCAA CGAGATATTT TGGAACGAGC AATCTCAGTT CTACGCCTAT
GCACTGGACG GCAACAAGAA AAAGGTGATG TCAGTGGCAT CGAATGTCGG GCAGTGCCTA
TGGTCCGGCA TCATCGCGCC CGAACGAGCC GGCATCGTGG TGAAGCGGCT GATGCGAAAG
GATATGTGGA GCGGCTGGGG AATCCGTACG CTGTCATCGG ACCATCCCTC GTTCAATCCT
TACAATTATC AGACCGGCGC GGTATGGCCG CATGACAACT CTCTGATCGC ATTGGGTATG
CGGCGCTACG GTTTTGCTGC CGAGGCCGCC GCGGTGGCGC GCGACATCAG CGGCGCCGCC
AGCCATTTCC TGCTGAATCA ATTGCCTGAG CTATTTGCCG GGCTGCAGCG CGACCCCACG
AGCTTCCCCG TGCAGTATCT CGGCGCCAAC GTTCCGCAGG CTTGGGCGGC GGGAGCCCCC
TTCATGCTGC TACAGGCCAT GCTGGGCCTC CAACAGGATG CGCCGCGCGG CAAGCTGTAC
GTCGACCCAG CCTTGCCTGA TTGGTTGACG GACGTGACGC TCACCGATCT GCGGCTGGGG
CGGCGGCGCT TCAATATCCG TTTCTGGCGG GACGGCAAGA GCACGATCTT CAAGATATTG
AAGGGCAGTC CCGACGCGGT AGAGCGGTTG AGTGCATGTG ACGTTGATTC AGGTCCAACG
GATGCACAGC GGTATTGTTC CGAAGCTTGA
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| Protein sequence | MSFKVQVGPA QIAIHQGQTV LVTEPDGQIN WPSKRGLYFR DTRVISAWGI YANGERWELL
NGGGAAPHVA RVLLTNRGFV TKDGPIAART LGLVIGRHID GGLHEDLDIT NNSQKPVRFN
LEIAIRADFA DVFEVKGDNI VRRGRTVTSW SAKRGILRIT YRNKDFCREV MVRTGEGDGE
PAVNANGRLS FDVILKAGQA WHRCLIYDLV DGTKHIRAPR KCSHSGTTSE HAGNMDKWRR
TVLKIDTSNE EFYRCFSQGV QDMAALRLPL KDTDHMVFVP AAGLPWFVAL FGRDTLIVSL
QTMIVYPEFA AGTLEILAQY QATQRDDYRD AEPGKILHEL RYGELAHFKL IPHTPYYGTA
DATPLYLIAL HGAWRASGDR ALIERYLPNA EACLTWIDKY GDRDGDGFQE YQTRSPAGYE
NMAWKDSGDA VMYPDGTLVR GPKALCELQG YVYDAWLRMA EIYDELDNKR RANALRKKAA
VLFRKFNEIF WNEQSQFYAY ALDGNKKKVM SVASNVGQCL WSGIIAPERA GIVVKRLMRK
DMWSGWGIRT LSSDHPSFNP YNYQTGAVWP HDNSLIALGM RRYGFAAEAA AVARDISGAA
SHFLLNQLPE LFAGLQRDPT SFPVQYLGAN VPQAWAAGAP FMLLQAMLGL QQDAPRGKLY
VDPALPDWLT DVTLTDLRLG RRRFNIRFWR DGKSTIFKIL KGSPDAVERL SACDVDSGPT
DAQRYCSEA
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