Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4164 |
Symbol | |
ID | 4025603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007959 |
Strand | + |
Start bp | 122904 |
End bp | 124139 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637964716 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_571624 |
Protein GI | 92109336 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGTG TAATCGGAAT TGATACCCAC CGTACCTTTG GGGAAGTAGT AATCTGGGAA GATGGTCGAC TGCGACACAT GGGTCGGGTC GATATGACGC GAACTGCGCT GGAAGGCTTC GGCAAAACGC TTCTGACCAC CGACGAGGTG GTCATCGAGG CTACCGGTAA CTGCATGGCG GTCTCTCGGG TGCTGTCACC GTTCGTGAAG CGGGTAGTGA TCGCCAATCC ACTGCAGGTG AAGGCGATCG CGCACGCCCA TGTGAAAACC GACAAGATCG ACGCCGGCAC GCTGGCCAAC TTGTATGCAG CCGGCTACCT GCCGGAGATC TGGACACCCG ATGCTGTCAC GGAGCGGATG CGCCGCCTGG TGGCGCGACG CTACCAGGTT GTCCGGCATC GGACCCGAAT CAAGAACGAG GTGCACTCGA TCCTCTATGC TCACCTGATT CCGCAGTGCC CTCATGCCGA CCTGTTCGGG CGGCTCGGTC GTGCCTGGCT CATCCGACAG CAGGTGCCGG ATGACGAGCG CGCCGCGATC GAGCGTCATA TCCGGGAACT GGATCGGTTG GGAGAGGATC TCGGCGTGCT TGACCGGGAG ATCGCTGAGG GCGCCCTCAG CGATACGGCG ATCGAACGGC TGCTCACAAT CACTGGCGTC AATCTCACGG TGGCCGCCGG GCTAGTGGCG GCGATCGGCG ATATAGGCCG CTTTTCCAAC CCCCAAAAGC TGGTGAGTTA CTTCGGCCTG AACCCACGCG TGCGCCAGTC GGGGCTTGGG GCAGCCCATC ACGGGCGGAT CAGCAAGGTC GGACGCAGTC ATGCCCGCGC GATGCTGGTG GAAGCCGCCT GGGCAGCCGC CAAGACGCCA GGCCCACTCC ATGCCTTCTT CGTCCGCGTC CGGGCCAGGC GGGGCCATCA GGTCGCTGCC GTTGCAGTGG CGCGCAAGCT GACCGTCCTG TGCTGGCATA TGCTGACGAA AGAAACGAAC TACCTCTGGG CACGCCCCAG TCTCGTTGCC CACAAAATGC GCGGCATGGA GTTGCAAGCC GGCCGACCGC AGAAGAAAGG CAACACGCGC GGCCCCGCCT ACGCCTACAA CGTCAAGAAA CTCCGGAACC AGGAAATGCG CGTCGCCGAA CAGGCACAGA AGGGCTACGA GCACTTTGTC GAAGCCTGGC GCCCGCGCCC GCCAAAAAAG GCGCGCGGGC GCCTCAATCC GGCAAGGCTC GAATAA
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Protein sequence | MRRVIGIDTH RTFGEVVIWE DGRLRHMGRV DMTRTALEGF GKTLLTTDEV VIEATGNCMA VSRVLSPFVK RVVIANPLQV KAIAHAHVKT DKIDAGTLAN LYAAGYLPEI WTPDAVTERM RRLVARRYQV VRHRTRIKNE VHSILYAHLI PQCPHADLFG RLGRAWLIRQ QVPDDERAAI ERHIRELDRL GEDLGVLDRE IAEGALSDTA IERLLTITGV NLTVAAGLVA AIGDIGRFSN PQKLVSYFGL NPRVRQSGLG AAHHGRISKV GRSHARAMLV EAAWAAAKTP GPLHAFFVRV RARRGHQVAA VAVARKLTVL CWHMLTKETN YLWARPSLVA HKMRGMELQA GRPQKKGNTR GPAYAYNVKK LRNQEMRVAE QAQKGYEHFV EAWRPRPPKK ARGRLNPARL E
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