| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4144 |
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| Symbol | |
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| ID | 4025531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | + |
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| Start bp | 101188 |
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| End bp | 103593 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637964703 |
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| Product | putative GAF sensor protein |
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| Protein accession | YP_571611 |
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| Protein GI | 92109323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAATG CGCCGACAGA CCCCGGGCGT CTATCATCGA GCCAATCCCT TGGGGATTCG
GTCACGCCTC GCGAACTGGA TATCGTGAAA GTGGCGGCCG CGCTAGTGTC GGGCGGGGTT
CTGCTTACAG GCCTGTATTA CGGCCGCCAA ATACTCATAC CGCTCGCGAT CGCGTTCCTG
ATCACGTTTG CTCTGAATCC GCCGGTCACA TGGCTTGCCC GGCTCGGTCT GCCGAGACTG
CTCGCGACGA GCCTCGTCAT GGTGACGGTC GTGTGCGCTC TGGTTGGACT AGGGACCATT
CTCGGCACAC AGGTCCGTTC GATCGCGGTC GAATTGCCGG CCTATCAATC GACGATACTG
ACAAAATTGG CGGATCTGCG CCAAAACCTC AAAGCACCGG GCTTGTTCGA CGGCGTTCTG
AAAATCTTTG AACGCGTCCA GAAAGAGGTC GAGTTAAAAG ACGACAGACC TGCGGAAGGC
TCCCCCCTCC CACAGCGAGT GGAAATCGTC CCCGAACCGC AAACGCCGTT TGAGCAGGCA
TTCGCGTGGC TTGTGCGGTC AGCGGAGCCT CTGGCCACGT CCGGCATCAT CTTGATCTTC
GTCTTTCTGG CGCTGCTTGA TAGCGCTGAC CTTCGCGACC GGTTTCTGCG CCTATTGGGA
GGGAACTTCC ATCGCTCGAC TGATGCGATT CAGGAGGCTG GCGCGCGGAT CAGCAGATAC
CTTCTGATGC AGTTGCTCGT AAACGTCAGT TATGGCGTCC CGCTGGCTAC CGGCCTCTGG
ATCATCGGTG TACCAGGCGC CCTGCTATGG GGCGCCGTGG GCGCGATCAT GCGCTTCGTC
CCCTATATCG GCCCGCTGAT TGCTGCGATT TTTCCAATCG CGCTCGCGTT TGCTGTCGAC
AGCGGCTGGA GCATGCTGCT CTGGTCCGTT GCGCTGATCG TCATGCTCGA GTTGATAAGC
AGCAACATTG TCGAGCCCTT GCTCTATGGT TCCAGCACCG GCCTGTCGGC CATATCGCTG
ATCGCCGCGG CGACACTATG GACAGTGCTT TGGGGGCCCC TGGGGCTCAT CCTCTCCACT
CCCCTTACGG TCTGTTTGCT GGTTCTCGGG CGCAATCTGC CGCAGCTGCG CTTCCTCGAC
ACCATGCTCG GCTCGACACC TGCACTGGAT ATTCCGGCCC GCATCTATCA GCGGCTGATT
GCAAATGACG CCGACGAAGC TGTCGAGATT GCAAGCACCG AGATCGAAAA GTCTTCGGTC
GTATCATTCT ACGATGCAAT CGGCATTGAA GTCCTTCGGC TGGCAAGCGA GGACTATCTC
CAGAACGCAG GCGCCGAGCA CCGCCTGCGT CTGGCAAGCG GAATGGATAC ACTGCTCGAC
GACCTGAACG ATCAATTCCC CTCCTGCCGG AGGCCGGAGG CAAGGCCCAG GGTCCTATGC
ATCGGAGGAA AATGGGAGAT TGATGCCATC GCCTGCGAGA TGCTCGCCCA TGCGCTCGCT
TTCGAAGGGA TCGCCGCGGC TTCCCAACCC GCTGCTAGCG TCAATGCCGA CTATCTGGCC
AAGCTCGACC TAAAGGGCGC GGACATTGTC TGCCTTAGCT ACCTTACGCC GCATCCAGCT
ATCCCCGCTC GCCACGCCTG CCGGCGTCTG CGAAGACGAT GGCCTAATCT GCGCATTGTC
CTTGCGCTAT GGAACGCGCC GCCGGAACTG CTGACCGACG AATCCCTTTC AGCGCTCAAA
GCCGATACTG TCGTGACTTC GGTTGAGGAG GCGGTTCGTC GTATTCACCG CATCATCGAC
CCCGAAGAAG CCAGGGTAGC CCAAAATGCC ACCGTGCCTG ACAACGACGC AGAGCGTGTC
GACGCGCTGA AAGCGACCGC GGTCTTGAAG GGTGATAAAC GTGAAGCTCT GGATGCACTC
GCCAAGCGTG CCGCCGACGT ATTCAACACC AGCGTTGCCG TGATCACCGC TATCGATAAG
GGTCGCGAAT ACTTCGTCGG ACAGAGTGGA AAATTGCCAG ACGCCATCAC CGATAATGCA
GGCACGCTGC TGCCGATGGA CCGCGATCAC GCAATCTGCA ACTACGTAGT AGCCAACGAC
GAGACGCTAG TCGTTTCGGA TATCGAGCGC GACCCGCGCT TTGCCGATAA CGAGACGATC
GAGCAATGGA ACATGCGCTT CTACGCCGGT TCGCCGCTCC GCGCAGCCGA CGGTCTGATA
ATCGGAGCGC TGTGCATTCT CGACTCCAAA CCCCGCACCC TGGAAGACAA TGAGGTCGCA
TTGCTCGAAA CGATGGCCGC CGATGTCGTA GCCACCATTA CAACGAGTGA TGCGGACAAA
GAAGTGTCGT TGAAGCCAGC CCGGACTACC TCATCTGCAA CGGTCGGGCA GGAGGTGCAC
CATTAA
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| Protein sequence | MPNAPTDPGR LSSSQSLGDS VTPRELDIVK VAAALVSGGV LLTGLYYGRQ ILIPLAIAFL
ITFALNPPVT WLARLGLPRL LATSLVMVTV VCALVGLGTI LGTQVRSIAV ELPAYQSTIL
TKLADLRQNL KAPGLFDGVL KIFERVQKEV ELKDDRPAEG SPLPQRVEIV PEPQTPFEQA
FAWLVRSAEP LATSGIILIF VFLALLDSAD LRDRFLRLLG GNFHRSTDAI QEAGARISRY
LLMQLLVNVS YGVPLATGLW IIGVPGALLW GAVGAIMRFV PYIGPLIAAI FPIALAFAVD
SGWSMLLWSV ALIVMLELIS SNIVEPLLYG SSTGLSAISL IAAATLWTVL WGPLGLILST
PLTVCLLVLG RNLPQLRFLD TMLGSTPALD IPARIYQRLI ANDADEAVEI ASTEIEKSSV
VSFYDAIGIE VLRLASEDYL QNAGAEHRLR LASGMDTLLD DLNDQFPSCR RPEARPRVLC
IGGKWEIDAI ACEMLAHALA FEGIAAASQP AASVNADYLA KLDLKGADIV CLSYLTPHPA
IPARHACRRL RRRWPNLRIV LALWNAPPEL LTDESLSALK ADTVVTSVEE AVRRIHRIID
PEEARVAQNA TVPDNDAERV DALKATAVLK GDKREALDAL AKRAADVFNT SVAVITAIDK
GREYFVGQSG KLPDAITDNA GTLLPMDRDH AICNYVVAND ETLVVSDIER DPRFADNETI
EQWNMRFYAG SPLRAADGLI IGALCILDSK PRTLEDNEVA LLETMAADVV ATITTSDADK
EVSLKPARTT SSATVGQEVH H
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