Gene Nham_4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4122 
Symbol 
ID4025738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007959 
Strand
Start bp80231 
End bp81343 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content58% 
IMG OID637964691 
Productputative transposase 
Protein accessionYP_571599 
Protein GI92109311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.758649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACG CGGCAGGACG CCCGGTTTCT CCCTTGATCC TCAGCGCGGA TGAGCGCGCG 
TATCTCGAAC GGCAGGTTCG TCGTCATCGC GTGGCGCGTT CTTTGTCTGA GCGATGCCGC
GTCATCCTGC GATGCGCGGA TGGCATACCC AGCAAATCCG TTGCGCACGA ACTGGGTGTC
CATGAGCATA CAGTTGGCAA GTGGCGTCGG CGCTTTCTGA AGGGGCGCAT CGAAGGGCTC
TTGGATGAAG CCCGCCCTGG CAGGCCTCGC ACGATTGATG ACGATCAGGT CGCTGCAATT
ATCGAACGCA CGCTCCGCTC CACGCCGAGC GACGCCACGC ACTGGTCCAT CCGTTCGATG
GCGACCGCGA CCGGCTTTTC GCACACGACG ATCCGAAGGA TTTGGAACGC CTTCGGCTTG
CAGCCGCACC GTTCGGAGAC ATTCAAGCTT TCCAGCGACC CATTATTTGT CGACAAGGTC
CGCGACATCG TCGGTCTTTA TCTGTCGCCG CCCAATCGGG CCCTGGTGCT CAGTGTCGAC
GAGAAGAGCC AGATACAAGC GCTTGATCGC GAGCAGCCGG TCCTGCCGAT GATGCCGGGC
ATTCCGGAAC GCCGGACGCA TTCCTATATC CGCCACGGCA CAACATCGCT GTTCGCGGCC
CTCGATGGTG CTTCCGGATT TGTGATCGGC AAATGCTACA AGCGCCATCG TGCTGCGGAG
TTCCTCGACT TCCTGAAGCA AATCGACGCT CACATTCCCG ACGGTCTCGA TATCCATATC
ATTATGGACA ACTACGCCAC TCACAAAACT GCTGTGATCA AATCCTGGCT GGTGCGACGA
CCGCACTACC ATGTGCACTT CACGCCAACA TCAGCATCGT GGATCAATCA GGTCGAGCGC
TGGTTTGCTG AACTCACCCG CAAGCAGATC CGCCGCGGCG TCCATACTTC GACCAAGCAG
TTGGAAAAAG ATATCCGCGC CTCATCGAGC GGCACAATGA AAATCCCAGG CCATATCGAT
GGACAAAGTC AGCTGACGAA ATCCTCGCCT CCGTCAAACG CTTCTGCCAG AAAACTCAGC
AAACCTTATG CCACGAATTT TAGATTCACC TGA
 
Protein sequence
MANAAGRPVS PLILSADERA YLERQVRRHR VARSLSERCR VILRCADGIP SKSVAHELGV 
HEHTVGKWRR RFLKGRIEGL LDEARPGRPR TIDDDQVAAI IERTLRSTPS DATHWSIRSM
ATATGFSHTT IRRIWNAFGL QPHRSETFKL SSDPLFVDKV RDIVGLYLSP PNRALVLSVD
EKSQIQALDR EQPVLPMMPG IPERRTHSYI RHGTTSLFAA LDGASGFVIG KCYKRHRAAE
FLDFLKQIDA HIPDGLDIHI IMDNYATHKT AVIKSWLVRR PHYHVHFTPT SASWINQVER
WFAELTRKQI RRGVHTSTKQ LEKDIRASSS GTMKIPGHID GQSQLTKSSP PSNASARKLS
KPYATNFRFT