| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4092 |
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| Symbol | |
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| ID | 4025406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007959 |
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| Strand | + |
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| Start bp | 53683 |
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| End bp | 54978 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637964668 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_571576 |
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| Protein GI | 92109288 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTGA TTACGATGAG CCGGACGGAG ATCGACCGGA TGGACGTGTT GCAGGATTTG
GCGGCGGGTC GGATCAAGGT TGCTGCGGCG GCGACGTTGA TGGATTTGGG ACGGCGTCAG
GTCTATCGGC TGGCTAAAGG GTACAGCCGG AGTGGACCTA AAGCGCTTGT TTCACGGCGG
CGCGGTCTTC CGAGCAACCG CTCCTACCCA ACGACTTTGC GTGAGACGGT GATTGGAATC
ATCCAAGAAC GTTACGGCGA CCTCGGACCG ACGCTGGCCA CGGAGAAGCT TGCGGAGCTT
CATGGCATCT GCCTGGCGCG CGAGACGGTG CGGCAATGGA TGATCGCGGC GGATCTTTGG
AAGGATCGCC GGGCCCGTCT GAAGCCGGTG CATCAACCGC GGTACCGGCG CGACTGCGTT
GGCGAATTGA TTCAGATCGA CGGATCGGAG CACTGGTGGT TCGAGGGTCG CGGTCCCAAA
TGCACCCTGC TCGTCTATAT TGACGATGCG ACCAGCCGGC TGATGCATCT GCAGTTCGTT
CAGAGCGAGA GCACGTTCGA TTATTTTGCA GCGACACGGG CCTATCTGGA GCGCTATGGC
AAGCCGGTCG CGTTCTACTC GGACAAGCAC GGCGTATTCC GGGTCAACAA GAAGGATGCG
GTGGGCGGTG ATGGCATGAC CCAGTTCGGC CGAGCCCTGC ACGCCATGAA CATCGATATC
ATTTGCGCCA ACTCCTCACA GGCCAAGGGG CGAGTCGAGC GGGCCAATGG CACGCTGCAA
GATCGGCTGG TGAAAGAGAT GCGGCTTTGT GGCACCGACA CGATTGAAGC CGGCAATGCA
TTCTTACCGA CCTTCATGGC GGCCTATAAC GCGCGCTTTG CCAAGCCCCC CTTCAACGAG
CAGGATGTTC ATCGCGCCCT CGCCGAACAT GATGATCTCG ATGATGCGTT TGCCTGGAAG
GAGGAACGCA CCGTGTCGAT GAACCTGACG CTGCAGTATG ACCAGGTGCT GTTCATGCTG
GATCCGACGC CGATCAGCAG GCCGCTGGCC CGCGAGCGCG TGACCGTGGT CGATTATCCC
GACGGGCGGC TTGCGATCCG CCATAACGGG GTCGATCTGC CCTATCGCAC CTTCGACAAG
CGGGCGCAGG TCAATCAGGC TGCCATTGTC GAGAACAAAC GTTTAGGGCC GATCCTGGCC
TACATTGCCG AGCAGCAAAA GCAGCTCGAC ATGTCGCGCT CCGCCAAGGC GCCACGCCGG
CGGGGCCAGA AGAATCACAT CTTCAAGGTC GGCTAG
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| Protein sequence | MTVITMSRTE IDRMDVLQDL AAGRIKVAAA ATLMDLGRRQ VYRLAKGYSR SGPKALVSRR
RGLPSNRSYP TTLRETVIGI IQERYGDLGP TLATEKLAEL HGICLARETV RQWMIAADLW
KDRRARLKPV HQPRYRRDCV GELIQIDGSE HWWFEGRGPK CTLLVYIDDA TSRLMHLQFV
QSESTFDYFA ATRAYLERYG KPVAFYSDKH GVFRVNKKDA VGGDGMTQFG RALHAMNIDI
ICANSSQAKG RVERANGTLQ DRLVKEMRLC GTDTIEAGNA FLPTFMAAYN ARFAKPPFNE
QDVHRALAEH DDLDDAFAWK EERTVSMNLT LQYDQVLFML DPTPISRPLA RERVTVVDYP
DGRLAIRHNG VDLPYRTFDK RAQVNQAAIV ENKRLGPILA YIAEQQKQLD MSRSAKAPRR
RGQKNHIFKV G
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