| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4041 |
|---|
| Symbol | |
|---|
| ID | 4025394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007959 |
|---|
| Strand | + |
|---|
| Start bp | 99 |
|---|
| End bp | 1436 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637964631 |
|---|
| Product | transposase, IS4 |
|---|
| Protein accession | YP_571539 |
|---|
| Protein GI | 92109251 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.923218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGC TGAGTTTCGC GTCGCTCGAT TATGCGGCCA AGAAGAAGCG CACGAAGCGA
GATGCGTTTT TGGCTGAGAT GGCAGCCGTG GTGCCTTGGG TCGCGCTCGA AGCTTTGATC
GAGCCGCATT ATCCCAAGGC TGGTCCGAGT GGCGGTCGGC GACCATTTCC ATTGGCCGTG
ATGCTACGGA TTTATTGCTT GCAGCAGTGG TATAACCTCT CTGATCCCGG CGCGGAAGAA
GTCCTTTACG ACATTTGCTC GATGCGCACG TTCGCGGGTC TGGAGCTCGG ACGCGACACA
ATTCCCGATG AGACGACCAT CTTGAACTTC CGGCATCTGC TGGAGCGTCA CGAGTTGACG
AAGGCGATAT TCGTCGCGAT TGCAGAGTTT CTGGAGACTC GCGGTGCTCT GCTGCGTGGC
GGCACCATCA TCGACGCGAC GCTGATCGCG GCATCGCCAT CGACGAAGAA CAAGGCACAG
AAGCGCGACC CCGAGATGCG CTCATCGAAG AAGGGCAACC AGTGGTACTT TGGCATGAAG
GCCCACATCG GTGTCGATGC GACAAGCGGG CTCGTGCACA CCGCAGGCGT GACCACAGGC
AGTGTGCATG ACGCCAAGGT CATGGACAAT CTGATCCGCG AGGATGATCG TGCGGTGTAT
GGCGACAAGG GATATGCCAA CGACCGCAAA CAACGACAGG CGGAAGCAGC GGGCGTTCTG
TGGGCCGTGA AGGCGAAAGC GAAGCCCGGG CGCCCCCTGT CGATATCGCA ACGCCGCCGC
AATCGCCGCT TCGGAAAAAT CCGCGCCAAG GTCGAGCACG TGTTCCGGGT GATGAAATGC
CAGTTCGGCT ATCGCAAAGG TTCGCTATCG CGGCATCGCC AAAAACGGCG CACAGGTCTT
CGCGTTGCTC GCTCTCGCAA ACCTATTCCT TGCCCGCAGG ACACTTGCGT CCGCTTGACA
AAGTCGCCGG ACGATTGCCG CCCGCGGCAG GTGCAAACAA AGAACCCTTC ACCGCCAGCG
CAAACCTGTT GCGACTGCTT CAGAAAAAGT GACGTTGCTC AGAGGTTCCC TAACTCTGCT
TACCTGTCCG GCACCAGGGG CCCACTCCAA TACGGGGTCA AACTTCGGCG CCGATTGACA
ACTGCTGGCG GACAGACGCG GGAGGCTCTC CTCCGCCGCG ATCCACGCGC GGCGTTCAAA
CAGCTTTCGC CAACTGCTGA AGAACGGGTA CGTGGTCGCA GCCACCTGCG AACCCGACCA
GCCGTTACGT CGCCGCAACG ACGTTTACGG CTAGTGCTTT GCGCAAAACG TGTTCGCGTT
CACACCACTC CTTTCTGA
|
|---|
| Protein sequence | MAQLSFASLD YAAKKKRTKR DAFLAEMAAV VPWVALEALI EPHYPKAGPS GGRRPFPLAV
MLRIYCLQQW YNLSDPGAEE VLYDICSMRT FAGLELGRDT IPDETTILNF RHLLERHELT
KAIFVAIAEF LETRGALLRG GTIIDATLIA ASPSTKNKAQ KRDPEMRSSK KGNQWYFGMK
AHIGVDATSG LVHTAGVTTG SVHDAKVMDN LIREDDRAVY GDKGYANDRK QRQAEAAGVL
WAVKAKAKPG RPLSISQRRR NRRFGKIRAK VEHVFRVMKC QFGYRKGSLS RHRQKRRTGL
RVARSRKPIP CPQDTCVRLT KSPDDCRPRQ VQTKNPSPPA QTCCDCFRKS DVAQRFPNSA
YLSGTRGPLQ YGVKLRRRLT TAGGQTREAL LRRDPRAAFK QLSPTAEERV RGRSHLRTRP
AVTSPQRRLR LVLCAKRVRV HTTPF
|
|---|
| |