| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_R0067 |
|---|
| Symbol | |
|---|
| ID | 4024609 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 4547243 |
|---|
| End bp | 4550074 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 640714105 |
|---|
| Product | 23S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AATCAAGTGC CTTAAGGGTG TTCGGTGGAT GCCTAGGCGC TGAGAGGCGA TGAAGGACGT
GCTACGCTGC GATAAGCCAC GGGGAGCTGC GAAGAAGCTT TGATCCGTGG ATTTCCGAAT
GGGGAAACCC ACCTTCGATA GCCGGAACTC CAAGGTCTTG TTGTCCGCAA GGACAGCGAG
ATTTTGGATT TCCGGTTATC AAGAGAAGGT ATGAGACTCC TGAATACATA GGGGGTTTCA
AGCGAACCCA GGGAACTGAA ACATCTAAGT ACCTGGAGGA AAGGACATCA ACAGAGACTC
CGTTAGTAGT GGCGAGCGAA CGCGGACCAG GCCAGTGGTA CATCAAAGAC AACCGGAACC
AGTCAGGAAA GCTGGGCCTT AGAGGGTGAT AGCCCCGTAC GGGTAATGCG ATGATGTATC
CTTGAGTAAG GCGGGACACG TGAAATCCTG TCTGAACGTG GGGGGACCAC CCTCCAAGCC
TAAGTACTCC TCAGCGACCG ATAGTGAACC AGTACCGTGA GGGAAAGGTG AAAAGCACCC
CGACGAGGGG AGTGAAATAG TTCCTGAAAC CGGACACTTA CAAACAGACG GAGCCCAAGA
TACGTTCTGG GTGACGTCGT ACCTTTTGTA TTATGGGCCA GCGACTTAAT TTAACGAGCA
AGCTTAAGCC GATAGGTGAA GGCGTAGCGA AAGCGAGTCT GAATAGGGCG TCAAGTTCGT
TGGATTAGAC CCGAAACCTA GTGATCTAGC CATGAGCAGG TTGAAGGTGA GGTAACACTC
ACTGGAGGAC CGAACGGGTG CCTGTTGAAA AAGGCTCCGA TGACTTGTGG TTAGGGGTGA
AAGGCCAATC AAACTGGGAA ATAGCTGGTT CTCCGCGAAA GATATTTAGG TATCGCCTCG
GACGAATACC TCGGGGGGTA GAGCACTGGA TGGGCTAGGG GGACTTACCG TCTTACCAAA
CCCAACCAAA CTCCGAATAC CCGAGAGTAC TATCCGGGAG TCACACGGCG GGTGCTAACG
TCCGTCGTGG AGAGGGAAAC AACCCGGACC TACAGCTAAG GCCCCTAATT CGTGGCTAAG
TGGGAAAGGA TGTGGGAATC CCAAAACAAC CAGGAGGTTG GCTTAGAAGC AGCCATCCTT
TAAAGAAAGC GTAACAGCTC ACTGGTCTAA ATAAGGGTTC CTGCGCCGAA GATGTAACGG
GGCTCAAGCC ACGAGCCGAA GCTTAGGGTG TGATCCGCAA GGGTCACGCG GTAGCGGAGC
GTTCTGTAAG CCTGCGAAGG GCGACCCGTG AGGGCGCCTG GAGGTATCAG AAGTGCGAAT
GCTGGCATGA GTAACGACAA ACACTGTGAA AGACAGTGTC GCCGAAAGTC CAAGGGTTCC
TGCGTAAAGT TAATCTTCGC AGGGTTAGCC GGTCCCTAAG GCGAGGCCGA AAGGCGTAGT
CGATGGGAAT CACGTGAATA TTCGTGAGCC AGTGGATGGT GACGAATCCC TTATGTTGTC
CGACCTTACT GGATTGGTCG GGCCTCGACG GGGTTCCAGG AAATAGCCTC CACATCAGAC
CGTACCCGAA ACCGACACAG GTGGACTGGT AGAGTATACC AAGGCGCTTG AGAGAACGAT
GTTGAAGGAA CTCGGCAATT TACCTCCGTA ACTTCGGGAT AAGGAGGCCT TCTGTTTGCG
CAAGCAGGCA GGAGGGGCAC AGACCAGGGG GTGGCAACTG TTTAACAAAA ACACAGGGCT
CTGCGAAATC GCAAGATGAC GTATAGGGTC TGACGCCTGC CCGGTGCCGG AAGGTTAAGA
GGAGGGGTGC AAGCTCTGAA TTGAAGCCCC GGTAAACGGC GGCCGTAACT ATAACGGTCC
TAAGGTAGCG AAATTCCTTG TCGGGTAAGT TCCGACCTGC ACGAATGGCG TAATGACTTC
CCCGCTGTCT CCAACATCGA CTCAGTGAAA TTGAATTCCC CGTGAAGATG CGGGGTTCCT
GCGGTCAGAC GGAAAGACCC CGTGCACCTT TACTGTAGCT TTGCGCTGGT ATTCGTGACT
GTTTGTGTAG AATAGGTGGT AGGCTTTGAA GCCGGGGCGC CAGCTCTGGT GGAGCCGAAA
TGTGAAATAC CACCCTAATG GTTATGGATA TCTAACCGCG TCCCCTCATC GGGGTCCGGG
ACAGCGCATG GTGGGCAGTT TGACTGGGGC GGTCGCCTCC CAAAGAGTAA CGGAGGCGTG
CGACGGTAGG CTCAGAACGG TCGGAAATCG TTCGTCGAGT ACAATGGCAT AAGCCTGCCT
GACTGCGAGA CTAACAAGTC GAGCAGAGAC GAAAGTCGGT CATAGTGATC CGGTGGTCCC
GCGTGGATGG GCCATCGCTC AACGGATAAA AGGTACGCCG GGGATAACAG GCTGATGACG
CCCAAGAGTC CATATCGACG GCGTCGTTTG GCACCTCGAT GTCGGCTCAT CACATCCTGG
GGCTGGAGAA GGTCCCAAGG GTTCGGCTGT TCGCCGATTA AAGTGGTACG TGAGCTGGGT
TCAGAACGTC GTGAGACAGT TCGGTCCCTA TCTGCCGTGG GTGTTGGAAT GTTGAGAGGA
TTTGCCCCTA GTACGAGAGG ACCGGGGTGA ACGTACCTCT GGTGGAGCTG TTGTCGCGCC
AGCGGCAGTG CAGCATAGCT ATGTACGGAC GGGATAACCG CTGAAAGCAT CTAAGCGGGA
AACCCACCTC AAAACGAGCA TTCCCTTGAG AACCGTGGTA GACCACCACG TTGATAGGCC
GGATGTGGAA GTGCGGCAAC GCATGTAGCT TACCGGTACT AATCGTTCGA TTGGCTTGAT
TGCTCTCATT AT
|
|---|
| Protein sequence | |
|---|
| |