Gene RPD_R0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_R0012 
Symbol 
ID4020811 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp407217 
End bp408691 
Gene Length1475 bp 
Protein Length 
Translation table 
GC content55% 
IMG OID640714050 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0131794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GATCCTGGCT CAGAGCGAAC GCTGGCGGCA GGCTTAACAC ATGCAAGTCG AACGGGCATA 
GCAATATGTC AGTGGCAGAC GGGTGAGTAA CGCGTGGGAA CGTACCTTTT GGTTCGGAAC
AACTGAGGGA AACTTCAGCT AATACCGGAT AAGCCCTTAC GGGGAAAGAT TTATCGCCGA
AAGATCGGCC CGCGTCTGAT TAGCTAGTTG GTGTGGTAAA GGCGCACCAA GGCGACGATC
AGTAGCTGGT CTGAGAGGAT GATCAGCCAC ATTGGGACTG AGACACGGCC CAAACTCCTA
CGGGAGGCAG CAGTGGGGAA TATTGGACAA TGGGCGAAAG CCTGATCCAG CCATGCCGCG
TGAGTGATGA AGGCCCTAGG GTTGTAAAGC TCTTTTGTGC GGGAAGATAA TGACGGTACC
GCAAGAATAA GCCCCGGCTA ACTTCGTGCC AGCAGCCGCG GTAATACGAA GGGGGCTAGC
GTTGCTCGGA ATCACTGGGC GTAAAGGGTG CGTAGGCGGG TCTTTAAGTC AGAGGTGAAA
GCCTGGAGCT CAACTCCAGA ACTGCCTTTG ATACTGAGGA TCTTGAGTAT GGGAGAGGTG
AGTGGAACTG CGAGTGTAGA GGTGAAATTC GTAGATATTC GCAAGAACAC CAGTGGCGAA
GGCGGCTCAC TGGCCCATAA CTGACGCTGA GGCACGAAAG CGTGGGGAGC AAACAGGATT
AGATACCCTG GTAGTCCACG CCGTAAACGA TGAATGCCAG CCGTTAGTGG GTTTACTCAC
TAGTGGCGCA GCTAACGCTT TAAGCATTCC GCCTGGGGAG TACGGTCGCA AGATTAAAAC
TCAAAGGAAT TGACGGGGGC CCGCACAAGC GGTGGAGCAT GTGGTTTAAT TCGACGCAAC
GCGCAGAACC TTACCAGCCC TTGACATGTC CAGGACCGGT CGCAGAGATG TGACCTTCTC
TTCGGAGCCT GGAGCACAGG TGCTGCATGG CTGTCGTCAG CTCGTGTCGT GAGATGTTGG
GTTAAGTCCC GCAACGAGCG CAACCCCCGT CCTTAGTTGC TACCATTTAG TTGAGCACTC
TAAGGAGACT GCCGGTGATA AGCCGCGAGG AAGGTGGGGA TGACGTCAAG TCCTCATGGC
CCTTACGGGC TGGGCTACAC ACGTGCTACA ATGGCGGTGA CAATGGGATG CTAAGGGGCG
ACCCTTCGCA AATCTCAAAA AACCGTCTCA GTTCGGATTG GAGTCTGCAA CTCGACTCCA
TGAAGTTGGA ATCGCTAGTA ATCGTGGATC AGCATGCCAC GGTGAATACG TTCCCGGGCC
TTGTACACAC CGCCCGTCAC ACCATGGGAG TTGGTTCTAC CTGAAGGCAG TGCGCTAACC
CGCAAGGGAG GCAGCTGACC ACGGTAGGGT CAGCGACTGG GGTGAAGTCG TAACAAGGTA
GCCGTAGGGG AACCTGCGGC TGGATCACCT CCTTT
 
Protein sequence