Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4418 |
Symbol | |
ID | 4024943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4889453 |
End bp | 4890115 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637964627 |
Product | polysaccharide export protein |
Protein accession | YP_571535 |
Protein GI | 91978876 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCAG TGCGTTTGGT AAGTGCGTTT CGATTGTCGA TGATCGCCGT GACGGCAGCG CTCGCGCTCG GCGGCTGTAT GCGGCGGTCG GGTCCGGTCG CGGTTCAGCC CTCGAACACG CTCGACAGCC TCGCTTATGG CGGCGGCTAT GCCGCCCCCG GCCCGGTGGC GTATGCGGCC GCGCCGCTGC CGGCCAGCCC CCAACCCGAA TATCGGCTCG ACGCCGGCGA CCGGCTGCGC ATCGTGGTCT ACGGTCAGGA AGGCCTTACC AACACCTACG CGATCGACGC GTCCGGCGCG ATCACCATGC CGCTGATCGG CAGCGTGCCG GCGCGCGGCC GCACCGCCGC GGGTCTTGCC GCCGCGATCT CCGCGCGGCT GCGCAACGGC TTCATCCGCG AGCCGTCCGT GGCGGTCGAG ATCGACTCCT ATCGGCCGTT CTTCATTCTC GGCGAAGTGC TGGCGCCCGG GCAGTACCCG TATGTGCCGA ACATGACCGT CGAAAGCGCG GTCGCGATCG CCGGCGGCTT TTCGCCGCGC GCCCGCCGTG ACAGCGTGAC GCTGACGCAC CCGGAGGGCG GCGCCGTGGT TCGCGCCGTC GTCCCGCTCG GCACCCCGCT CACCCCTGGC GACACCGTGC TGGTCAGCGA ACGCTGGTTC TGA
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Protein sequence | MAPVRLVSAF RLSMIAVTAA LALGGCMRRS GPVAVQPSNT LDSLAYGGGY AAPGPVAYAA APLPASPQPE YRLDAGDRLR IVVYGQEGLT NTYAIDASGA ITMPLIGSVP ARGRTAAGLA AAISARLRNG FIREPSVAVE IDSYRPFFIL GEVLAPGQYP YVPNMTVESA VAIAGGFSPR ARRDSVTLTH PEGGAVVRAV VPLGTPLTPG DTVLVSERWF
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