Gene RPD_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4417 
Symbol 
ID4024942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4888858 
End bp4889259 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content67% 
IMG OID637964626 
Producthypothetical protein 
Protein accessionYP_571534 
Protein GI91978875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAA CCGCACATAC TCGGATCGAC GGCGACGACA CACAGCAGGC GCTGCGCCGC 
ATGGCCTTGG TGCGGCTCGC GCTGATCGTC GCCGCGTCGT TGAGCGCAGC CCCGGTTTCG
GCGCAGCAAT TTGCGCCGGC GATCGTCACG CCGCCGTTCA CCGCGACGCT GTCCAACACC
GCGCCGCTGG CGTTCGGCAT GGATGCGTTC GAAGCCGAAC GTGCGCTCGG GATGCCGCTG
AACTATGTCA GCGGCCGGCC CGGCGACGAA GTCTTCCTTG TGATCCGCAC CGCCGGCGGC
AGCGGCTTCT TCAATCGCCG TGACCGGCTG TATCTGCAAT TCCGCCACGG TCGGCTGACC
GGCTGGAAAG GCGATTGGGG CCGCAACTGG ATGTGGCAGT AA
 
Protein sequence
MPQTAHTRID GDDTQQALRR MALVRLALIV AASLSAAPVS AQQFAPAIVT PPFTATLSNT 
APLAFGMDAF EAERALGMPL NYVSGRPGDE VFLVIRTAGG SGFFNRRDRL YLQFRHGRLT
GWKGDWGRNW MWQ