| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4412 |
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| Symbol | |
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| ID | 4024937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4883159 |
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| End bp | 4885018 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964621 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_571529 |
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| Protein GI | 91978870 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.659664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG CCGCTTCCCG CCTCGACGAC GATCTCGATG CCCGCGCGCT GTCGACGTTG
AACCATGTGT TCGGCCTGCC CGGATTTCGC GGCCATCAGG AGCAGATCGT CCGCCATGTC
GCGGGCGGCG GCGATTGTCT GGTGCTGATG CCGACCGGCG GCGGCAAGTC GCTGTGCTAC
CAGCTGCCGG CGCTGCTGCG TGACGGCTGC GGCATCGTGG TGTCGCCGCT GATCGCGCTG
ATGCGCGACC AGGTCGCGGG GCTGCTCGAG GCCGGCGTGC GCGCCGCGGC GCTGAATTCA
TCGCTGTCCT ACGCGGAAGC CGACGCGATC GAGCGGCAAT TGCTCTCTGG CGAACTCGAT
CTGCTCTATG TCGCGCCGGA GCGGCTGCTG ACGCCGCGCT GCCTTTCGAT GCTGGCGCGC
GCGAAGCTGT CGCTGTTCGC GATCGACGAG GCGCATTGCG TGTCGCAATG GGGGCATGAT
TTCCGCCCGG AATATGTCGG CCTGTCGGCG ATCGCCGAGA AATTCCCGAA TGTGCCGCGG
ATCGCGCTGA CCGCCACCGC CGACGCGCTG ACCCGCCGCG AGATCACCGA GCGGCTCGGC
CTCACCGAGG CGCCCTGCTT CGTGTCGAGC TTCGACCGGC CCAATATTCG CTACACCATC
GTCGACAAGC AGAATGCGCC GGCGCAGCTC AAGGCGTTCA TCGCCGACAA GCATACAGGC
CATTCCGGCG TGGTGTATTG CCTGTCGCGC GCCAAGGTCG AGGATACCGC GGCGGCGCTG
TGCAAAGCGG GCATCACCGC GCTGCCCTAT CACGCCGGGC TTCCGGCAGG GACGCGCGCG
GCCAACCAGG ACCGCTTCAT CAACGAGGAC GGCGTGGTGA TCGTCGCCAC CATCGCGTTC
GGCATGGGCA TCGACAAGCC GGATGTCCGC TTCGTTGCGC ATCTCGATCT GCCGAAAAGC
ATCGAGGCGT ATTATCAGGA GACCGGCCGC GCCGGCCGCG ACGGCAAGCC CTCGGATGCG
TGGATGGCCT ATGGCCTGTC CGACATCGTG CAGCAGCGCC GGATGATCGA CGAATCCACC
GGCTCCGAGG CGTTCAAGCG GGTCTCGGCC GGCAAGCTCG ACGCGCTGGT CGGCTTGTGC
GAGTCCACCG GCTGCCGCCG GACGCGCCTG CTCGGCTATT TCGGCGAGAC CTCGACCGAT
CTGCAGTGCG GCAATTGCGA CAACTGCCTC AGCCCGCCGA AGGTACAGGA CGGCACGGTG
GCGGCGCAGA AGCTGCTGTC CTGCGCGTAT CGCACCGGGC AGCGGTTCGG CGCGCAGCAT
CTGATCGACG TGCTGCTCGG CCGGCTGACC GAGCGCGTCG GTCAGTTCGG CCACGACAAA
TTGTCGGTGT TCGGGATCGG CGGCGAACTC AACGAGAAGC AATGGCGAGC GGTGATCCGG
CAATTGGTGT CGCTCGGCCA TCTGCTCCCG GACAGCGAGG CGTTCGGCGC GCTGAAGCTG
ACCGAGACTT CGCGCACGGT GCTGAAGGGC GAGACCCAGG TGATGCTGCG CGAACAGACC
GGCGGCCGAC CGCCGCGCGC GCGATCGCGC CGCGGTGATC TGGTCGGCAG CGGAGCGGCG
CGCGACGCTA CCGCCGGCGA CCCCGAGCTG TTCGCGGCGC TGAAGGCGTG GCGCGCAGGC
GTCGCGCGGG AACGCGGCGT GCCGGCCTAT GTGGTGCTGC ACGACGCCAC CATGGACGGC
ATCGCCGCCG CCAGGCCGCG CTCGCTCGAT GAGCTGCGCG GCATCGCCGG GATCGGCGAC
AAGAAGCTCG AACATTACGG CGCCGCGCTG CTGGCGGTGA TCGACGCCGC GCGCCGGTAA
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| Protein sequence | MTLAASRLDD DLDARALSTL NHVFGLPGFR GHQEQIVRHV AGGGDCLVLM PTGGGKSLCY
QLPALLRDGC GIVVSPLIAL MRDQVAGLLE AGVRAAALNS SLSYAEADAI ERQLLSGELD
LLYVAPERLL TPRCLSMLAR AKLSLFAIDE AHCVSQWGHD FRPEYVGLSA IAEKFPNVPR
IALTATADAL TRREITERLG LTEAPCFVSS FDRPNIRYTI VDKQNAPAQL KAFIADKHTG
HSGVVYCLSR AKVEDTAAAL CKAGITALPY HAGLPAGTRA ANQDRFINED GVVIVATIAF
GMGIDKPDVR FVAHLDLPKS IEAYYQETGR AGRDGKPSDA WMAYGLSDIV QQRRMIDEST
GSEAFKRVSA GKLDALVGLC ESTGCRRTRL LGYFGETSTD LQCGNCDNCL SPPKVQDGTV
AAQKLLSCAY RTGQRFGAQH LIDVLLGRLT ERVGQFGHDK LSVFGIGGEL NEKQWRAVIR
QLVSLGHLLP DSEAFGALKL TETSRTVLKG ETQVMLREQT GGRPPRARSR RGDLVGSGAA
RDATAGDPEL FAALKAWRAG VARERGVPAY VVLHDATMDG IAAARPRSLD ELRGIAGIGD
KKLEHYGAAL LAVIDAARR
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