| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4410 |
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| Symbol | |
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| ID | 4024935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4880173 |
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| End bp | 4881723 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637964619 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_571527 |
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| Protein GI | 91978868 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.648302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACCG GCCAATTTGC GAACACCCAC CCCGATCGCC CCGCTTTCAT CATGGCCTCG
ACCGGCGAGA CCGTGACCTA TGCGGAGCTC GAAGCCCGCA CCAACCGGCT CGCGCATCTG
CTGCGCAATC ACGGCCTGAA GCGGCTCGAC CATTATTCGG TCTTCATGGA GAACAACAAC
CGCTATCTCG AGGCCTGCGG CGCCGGCGAG CGGTCGGGCT ATTACTACAC CTGCGTGAAC
TCGTACCTGA CCGCCGCCGA GCTGGTCTAC ATTCTGACCA ACAGCGAATC GAAGGTGCTG
ATCACCTCGA CGGCCAAGCT CGACGTCGCC CGCGAGGCGC TGAAGGACTG TCCCCACGTC
ACGCTGTGCG TGGTGGTGGA CGGCGTCGGC GAAAGCGAGC GGATCGTCGG CCTCGCCGAG
GCGACAAAGG GTCTGCCCGA CACGCCGATC GCCGATGAAA GCCTCGGCAC CGCGATGCTG
TACTCGTCCG GCACCACCGG CCGGCCGAAG GGCATCCTGC GCCCGCTGCC GGAGCAGCCG
CCGTCGCAGC CGCTACCGCT GTTCCACTTC CTCAACATGC TGTGGAAGTA TCGCAACGAT
ATGATCTATC TGTCGCCGGC GCCGCTGTAC CACTCCGCGC CGCAGGCCGC GGTCGGCCTG
ACCATCCGGG ACGGCGGCAC CGTGATCATC ATGGAGCATT TCGATCCGGA GCAGTATCTG
GCGCTGATCG AGAAATACAA AGTCTCGCAC AGCCAGCTGG TGCCGACGAT GTTCTCGCGG
ATGCTGAAGT TGCCGGAAGA GGCGCGCAGC AAGCATGATC TGTCGACGCT GGAGGTGGCG
ATTCATGCCG CAGCGCCCTG CCCGCCGCAG GTCAAGGAAC AGATGATCAA ATGGTGGGGG
CCGATCATCC ACGAATATTA CGGCGCGACC GAAGGTCTCG GTTTCACCGC CTGCAACAGC
GAGGAATGGC TCAAGCATCG CGGCACCGTC GGCAAGGTGA TGTTCGGCGA TCTGCATATT
CTCGACGACC GGATGCAGCC CTGCCCCAAG GGAACGCCGG GGCAGATCTG GTTCAAGACC
GCGACGCCGT TCGAGTATTT CAACGATCCG AATAAAACCC AGGAGGCGCG CTCGGACGAC
GGCAGCATGA GCACGGTCGG CGACGTCGGC TATGTCGACG ACGACGGCTA TCTGCACCTC
ACCGACCGCG CCACCTTCAT GATCATCTCC GGCGGCGTGA ACATCTATCC TCAGGAATGC
GAGAACCTGC TGATCACCCA CCCCAAGGTC GCCGACGCCG CAGTGTTCGG CGTGCCGAAC
GAGGATCTGG GCGAAGAGGT CAAGGCGGTG ATCCAGCCGA TGCCCGGCGT CGATCCGGAC
AGCGATCTGG CGCAGGAGCT GATCGCGTTC TGCGGCCAGT CGCTGTCACG GCAGAAGGTG
CCGCGCTCGA TCGACTTCCT CGAGGAACTG CCACGGCTGC CGACCGGCAA GCTCTACAAG
CGCCTGCTGC GGGACAAATA TTGGGGGAAG GGCGAATCAA GGATCGTGTG A
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| Protein sequence | MYTGQFANTH PDRPAFIMAS TGETVTYAEL EARTNRLAHL LRNHGLKRLD HYSVFMENNN
RYLEACGAGE RSGYYYTCVN SYLTAAELVY ILTNSESKVL ITSTAKLDVA REALKDCPHV
TLCVVVDGVG ESERIVGLAE ATKGLPDTPI ADESLGTAML YSSGTTGRPK GILRPLPEQP
PSQPLPLFHF LNMLWKYRND MIYLSPAPLY HSAPQAAVGL TIRDGGTVII MEHFDPEQYL
ALIEKYKVSH SQLVPTMFSR MLKLPEEARS KHDLSTLEVA IHAAAPCPPQ VKEQMIKWWG
PIIHEYYGAT EGLGFTACNS EEWLKHRGTV GKVMFGDLHI LDDRMQPCPK GTPGQIWFKT
ATPFEYFNDP NKTQEARSDD GSMSTVGDVG YVDDDGYLHL TDRATFMIIS GGVNIYPQEC
ENLLITHPKV ADAAVFGVPN EDLGEEVKAV IQPMPGVDPD SDLAQELIAF CGQSLSRQKV
PRSIDFLEEL PRLPTGKLYK RLLRDKYWGK GESRIV
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