Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4404 |
Symbol | |
ID | 4024929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4875009 |
End bp | 4875674 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637964613 |
Product | winged helix family two component transcriptional regulator |
Protein accession | YP_571521 |
Protein GI | 91978862 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.656013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTGC TGGTGGCCGA GGACGATAGC CGGATCGCGT CGGATCTCGC GCGCGGCCTG ACGGAGGCTG GTTACATCGC CGAATGCGTC GCCGACGGCG AAGAGGCGTG GTTTCGCGGC GACACCGAGG ACTACGCCGC GATCATTCTC GATCTCGGCC TGCCCAGGCT CGACGGGCTG ACCATTCTGA AGCGCTGGCG CGAAGGCGGC CGCCGCACCC CGGTGCTGAT CCTGACCGCG CGCGGCAGCT GGGCCGAGCG CGTCGACGGC ATCGACGCCG GCGCCGACGA TTATTTGCCG AAGCCGTTCC GGATGGAGGA GCTGCTGGCG CGGCTGCGCT CGATCGTGCG CCGCTCGGCC GGCCACGCCT CATCGGTCGT CACCATCGGC GACGTCACCC TCGACGAACG CCAGATGCAG GTCACCGTGC GCGGCCAGCC GGCGCCGCTG TCGCCGCTGG AGTACCGGCT CGCGTCCTAT CTGGTGCTGC ATCGCGGCCG GGTGGTGTCG CAGTTCGAGT TGAGCGAGAG CATCTACGGT CAGGACGACG CGCATGATTC CAACGCGATC GAGGTGCTGG TCGGCCGCGT CCGCAAGAAG CTCGGCCCCG AACTGATCGA GACCCGGCGC GGCTTCGGCT ACATCGTGGC CGGGGATAGC AGGTGA
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Protein sequence | MRVLVAEDDS RIASDLARGL TEAGYIAECV ADGEEAWFRG DTEDYAAIIL DLGLPRLDGL TILKRWREGG RRTPVLILTA RGSWAERVDG IDAGADDYLP KPFRMEELLA RLRSIVRRSA GHASSVVTIG DVTLDERQMQ VTVRGQPAPL SPLEYRLASY LVLHRGRVVS QFELSESIYG QDDAHDSNAI EVLVGRVRKK LGPELIETRR GFGYIVAGDS R
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