| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4398 |
|---|
| Symbol | |
|---|
| ID | 4024923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4866604 |
|---|
| End bp | 4867692 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637964607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_571515 |
|---|
| Protein GI | 91978856 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5621] Predicted secreted hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.117298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTA GAGGCCTGAT CTCACGCCGC GCCTTCGCGG GCGGCTTGCT CGCGCTCGGG
GCCAGTGGGC AACGCGTGCT GGCACAAGGA TTCGCAGGGC TCGGCAGCGA CGCGGGCGAA
TTCGCGCCGG TCGTGCCCGG GCGGCGGCTT TCGTTTCCCG AGGACCACGG CCCGCATCCG
GATTTCCGCA TCGAATGGTG GTACCTCACC GCAAATCTGA AAGACGCCGA CGGCAAGCCC
TACGGCGTGC AGTGGACGCT GTTCCGTCAG GCGATGACGC CGGGCCCGCA GCGCGAGGGC
TGGGCCAGTC AGCAGATCTG GATGGCGCAT GCGGCGCTCT CCAGCGCCGA GACGCATCGC
TTCGCCGAAA AATTTTCGCG CGGCGGGATT GGGCAGGCCG GCGTTACGGC TGCGCCGTTC
CGCGCCCTGA TCGACGACTG GGCGATGCAG GGCGGCGACG CGATGAAGGC TGCGACGTTG
TCGCCGCTCG ACGTTACCGC ATCAGGCTCG GACTTCAGCT ATCGGCTGCA ATTGACCGCC
GAGCGGCCGC TAGTGCTGCA AGGCGACGCC GGCTTTTCGC GTAAATCCGA CCGCGGCCAG
GCTTCGTATT ACTATAGCCA GCCTTATTTT GCCGCGCGCG GGACGGTGAC GCTCGACGGC
CGGGCGATCG AGGTCAGCGG CACAGCCTGG ATGGACCGCG AATGGTCGAG CCAACCGCTC
GCTTCCGACC AGACCGGCTG GGACTGGTTC TCGCTGCATC TCGCCTCCGG CGAGAAGGTG
ATGCTGTTCC GGCTGCGCCA GAGCGGCGGC CAAGCCTATT TCGCCGGCAA CTGGATCGGG
CTCGACGGCA AATCCGAGCC GCTCGCGCCG GATGCGATCG CGCTCGAACC GATCGGCTTC
ACCGAGACCG CCGGCCGCAG ACTGCCGACG CGCTGGCGCA TCAGCCTGCC CGGCCACGGT
CTGTCGATCG AGACCACGCC GCTGAACCCC AACAGCTGGA TGGGGACCAG CTTCCCATAC
TGGGAGGGAC CGATCTCGTT CAGCGGCAGC CAGGCCGGCA TCGGATATCT TGAGATGACC
GGCTATTGA
|
|---|
| Protein sequence | MSARGLISRR AFAGGLLALG ASGQRVLAQG FAGLGSDAGE FAPVVPGRRL SFPEDHGPHP
DFRIEWWYLT ANLKDADGKP YGVQWTLFRQ AMTPGPQREG WASQQIWMAH AALSSAETHR
FAEKFSRGGI GQAGVTAAPF RALIDDWAMQ GGDAMKAATL SPLDVTASGS DFSYRLQLTA
ERPLVLQGDA GFSRKSDRGQ ASYYYSQPYF AARGTVTLDG RAIEVSGTAW MDREWSSQPL
ASDQTGWDWF SLHLASGEKV MLFRLRQSGG QAYFAGNWIG LDGKSEPLAP DAIALEPIGF
TETAGRRLPT RWRISLPGHG LSIETTPLNP NSWMGTSFPY WEGPISFSGS QAGIGYLEMT
GY
|
|---|
| |