| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4387 |
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| Symbol | |
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| ID | 4024912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4853425 |
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| End bp | 4854645 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964597 |
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| Product | major facilitator transporter |
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| Protein accession | YP_571505 |
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| Protein GI | 91978846 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.310839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGATG CGACCGCGAT CGACGGTTCA GCGGACGATG CGCGCGCGCG GTCGAACGTG
GTGCGACTCG CGGCGGCGCA GGCGCTGACC GGCGCCAATG CCGCGGTGAT CTTCGCCACC
GGCTCGATCA TCGGCGCGCA GCTCGCGCCG GATCTGTCGC TCGCGACCGT GCCGATCTCG
ATGTATGTGG TCGGCCTCGC TGCCGGCACG CTGCCGACCG GCGCGATCGC GCGCCGCTAC
GGGCGCCGCG CCTCCTTCAT GATCGGCGCC GGCTGCGGCG CGTTCACCGG CCTGCTCGGC
GCGCTGGCGA TCCTGTACGG CTCGTTCGAG CTGTTCTGCG TCGCCACGTT CCTCGGCGGG
CTTTACGGCG CGGTGTCGCA ATCCTATCGC TTCGCCGCCG CCGACGGCGC CAGCGTCGCG
TATCGCCCCA AGGCGGTGTC CTGGGTGATG GCCGGCGGCG TGTTCGCCGG CGTGCTCGGT
CCGCAGTTGG TGCAGTGGAC CATGGACATC TGGCAGCCTT ATCTGTTCGC CTTCAGCTAT
CTGGTGCAGG CCGCGGTCGC GTTGATCGCG ATGGCGGTGC TGTGGAGCGT CGATGCGCCG
AAGCCGCAGC CGGCCGACTT CGCCGGCGGC CGGCCGCTGC TCGAAATCGT GCGGCAGCCG
CGCTTCATCG CCGCGGCGAT GTGCGGCGCG ATCGCCTATC CGATGATGAA TCTGGTGATG
ACCTCGGCGC CGCTGGCGAT GCAGATGTGC GGACTCCCGC TCAGCGATTC CAATTTCGGC
CTGCAATGGC ACATCGTCGC GATGTACGCG CCGAGCTTCT TCACCGGCTC GCTGATCGTG
CGGTTCGGTG CGCCGCGGGT GGTCGCGTTC GGGCTCGTGC TCGAGGCGCT GGGCGCTGCG
ATCGGCCTGA CCGGGATCAC CGCGCCGCAC TTCTGGGCAA CGCTGTTCGT GATCGGGGTC
GGCTGGAATT TCGCGTTCGT CGGCGCCTCG GCGCTGGTGC TGGAGACGCA CATGCCGAAC
GAGAAGAACA AGGTGCAGGC GTTCAACGAT TTCGTGGTGT TCGGGATGAT GGCGCTGGGA
TCGTTCTTGT CCGGCCAGTT GCTGGCGAAT TACGGCTGGG CGACCGTCAA CATGACGGTG
TTCCCGCCGG TGCTGCTGGG CCTCGTGGTG CTCGCGATCA CCGGCTGGTC CAGAAAACGG
GTGGCGGCGC CGCGTCGGTG A
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| Protein sequence | MVDATAIDGS ADDARARSNV VRLAAAQALT GANAAVIFAT GSIIGAQLAP DLSLATVPIS
MYVVGLAAGT LPTGAIARRY GRRASFMIGA GCGAFTGLLG ALAILYGSFE LFCVATFLGG
LYGAVSQSYR FAAADGASVA YRPKAVSWVM AGGVFAGVLG PQLVQWTMDI WQPYLFAFSY
LVQAAVALIA MAVLWSVDAP KPQPADFAGG RPLLEIVRQP RFIAAAMCGA IAYPMMNLVM
TSAPLAMQMC GLPLSDSNFG LQWHIVAMYA PSFFTGSLIV RFGAPRVVAF GLVLEALGAA
IGLTGITAPH FWATLFVIGV GWNFAFVGAS ALVLETHMPN EKNKVQAFND FVVFGMMALG
SFLSGQLLAN YGWATVNMTV FPPVLLGLVV LAITGWSRKR VAAPRR
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