| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4382 |
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| Symbol | |
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| ID | 4024907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4847347 |
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| End bp | 4848372 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637964592 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_571500 |
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| Protein GI | 91978841 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.98504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTTC GAAAGGGCCT GCTGATCGGC CTCGGCTTCG CTGCCGTGAT TGCCGCCGCC
GCCGTGACCT ATGAGCGCTA CGACACCAAG ACGCTGAAGC GCACGATCCG GCGCGACGCC
GTGCTGTGCG GCGTAAACAA GGGCCTGCCC GGCTTCTCGA CGCCGGACGA CAAGGGCAAT
TGGAGCGGCT TCGACGTCGA CTTCTGTCGC GCTGTGGCGG CTGCAATCTT CAACGATCCG
AACAAGGTCA AGTTCGTGCC GCTCGACGCC AACGAGCGCT TCAAGGAATT GCAGAGCCGC
AAGGTCGACA TCCTGTCGCG CAACTCGACC TGGAGCATGT CGCGCGAGAC CGGTTACGAA
CTCTATTTCC CGGCGGTCGC CTATTACGAC GGTCAGGGCT TCATGGCGCC GGCGGCGCGC
AAGGTCGAGA CCGCGCTCGA ACTCGACGGC AGCAAGGTCT GCGTCCAGGA GGGCACCACC
ACGCTGCTCA ACCTCGCCGA CTTCTTCCGC ACCAACAACA TGAAGTATCA GGAGGTCAAG
TTCGGCAAGC TCGACGAGGT GGTGAGCGCC TACAAGAACG GCCAGTGCGA CACCTTCACC
GCCGACGCCT CCCAGCTCTA TGCGCTGCGG CAGACGCTCG ACAAGCCGGG CGATCACGTC
ATCCTGCCGG ACCTGATCTC CAAGGAGCCG CTCGCGCCGG TGGTCCGCCA GCGCGACGAC
GACTGGATGA TGATCGTGAA ATGGACGCTG TACGCGATGA TCAACGCGGA AGAGCTCGGC
ATCACCTCGA TCAACATCGA CGAGGCGCTG AAGTCCAAGA AGCCCGACGT GATGCGGCTG
GTCGGCACCG AGGGCACCTA TGGCGAAGAA CTCGGCCTGC CCAAAGACTG GGCGGCGCGG
ATCATCCGCC ACGTCGGCAA TTACGGCGAG ATCTACGATC GCAATGTCGG CAAGCTCGGC
ATCCCGCGCG GCCTGAACCA GCTCTGGAAC GCCGGCGGCA TCCAATACGC GCCGCCGATC
AGGTAG
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| Protein sequence | MSFRKGLLIG LGFAAVIAAA AVTYERYDTK TLKRTIRRDA VLCGVNKGLP GFSTPDDKGN
WSGFDVDFCR AVAAAIFNDP NKVKFVPLDA NERFKELQSR KVDILSRNST WSMSRETGYE
LYFPAVAYYD GQGFMAPAAR KVETALELDG SKVCVQEGTT TLLNLADFFR TNNMKYQEVK
FGKLDEVVSA YKNGQCDTFT ADASQLYALR QTLDKPGDHV ILPDLISKEP LAPVVRQRDD
DWMMIVKWTL YAMINAEELG ITSINIDEAL KSKKPDVMRL VGTEGTYGEE LGLPKDWAAR
IIRHVGNYGE IYDRNVGKLG IPRGLNQLWN AGGIQYAPPI R
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