| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4379 |
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| Symbol | |
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| ID | 4024904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4845507 |
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| End bp | 4846511 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964589 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_571497 |
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| Protein GI | 91978838 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.811647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATACG ACCTCGCAAC GATCTGGGCC TTCATCATCG CATTCGCGGT GTTCGTCTAT
GTGGTGATGG ACGGCTTCGA CCTCGGCCTC GGCATCCTGT TTCCGCTGTT TCCGGCGAAG
CGCGACCGTG ACGTCATCAT GAACAGCGTC GCCCCGGTGT GGGACGGCAA CGAAACCTGG
CTGGTGCTCG GCGGCGGCGG ATTGTTCGCG GCGTTCCCGC TCGCCTATGC GGTGCTGATG
CCGGCGCTTT ACACGCCGAT CATCGCGATG CTGCTCGGGC TGGTGTTTCG CGGCGTCGCC
TTCGAATTCC GCTGGCGGAC GCTGCGCGAG CGCAACCGCT GGGACATCGC CTTTTTCGGC
GGCTCGTTGA TCGCCACCTT GGCGCAGGGC GTCGCGCTCG GCGCGCTGCT GCAGGGCGTT
CAGGTCGAGG GCCGCGCCTA TGCGGGTGGC TGGTGGGACT GGCTGACCCC GTTCAGCGTG
CTCACCGGCG TCGCCCTGGT GGTCGGCTAC GCGCTGCTCG GCGCCACATG GCTGGTGATG
AAGACCACCG GCGAACTGCG CGACGAGGCC TATCGCCTGA GCCGCTGGCT GCTGATCGCG
ATGCTGATTG CGATCGTGGC CGTCAGCGCC GCGACGCCGT TCCTGAGCTA CGACTATTCG
CAGCGCTGGT TCGCCTGGCC GCACGTGCTC GCCACCGCGC CGGTGCCGAT CGCCGTCGCC
GGCGTCACCT TCCTGCTGCT GCGGGCGCTG ACGCAGCGGC GGGACTATCA GCCGTTCCTG
CTGACGCTGT GCCTGTTCGC ATTGTCCTAT GCGGGCCTCG GGATCAGCAT GTGGCCCTAT
GTCGTGCCGC GCAGCATCAG CATCTGGCAA GCCGCCGCCC CCGAGAGCAG TCAGCTGTTC
ATGCTGGTCG GCGTCGCGAT CCTGGTGCCG ATCATCCTGA TTTACACCGC GTGGGCCTAT
TGGGTGTTTC GCGGCAAGGT CGACCCCGAG AGCGGCTACC ATTGA
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| Protein sequence | MEYDLATIWA FIIAFAVFVY VVMDGFDLGL GILFPLFPAK RDRDVIMNSV APVWDGNETW
LVLGGGGLFA AFPLAYAVLM PALYTPIIAM LLGLVFRGVA FEFRWRTLRE RNRWDIAFFG
GSLIATLAQG VALGALLQGV QVEGRAYAGG WWDWLTPFSV LTGVALVVGY ALLGATWLVM
KTTGELRDEA YRLSRWLLIA MLIAIVAVSA ATPFLSYDYS QRWFAWPHVL ATAPVPIAVA
GVTFLLLRAL TQRRDYQPFL LTLCLFALSY AGLGISMWPY VVPRSISIWQ AAAPESSQLF
MLVGVAILVP IILIYTAWAY WVFRGKVDPE SGYH
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