| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4376 |
|---|
| Symbol | |
|---|
| ID | 4024901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4841944 |
|---|
| End bp | 4842687 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637964586 |
|---|
| Product | winged helix family two component transcriptional regulator |
|---|
| Protein accession | YP_571494 |
|---|
| Protein GI | 91978835 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA ACCCGCATAT CATCGTTGTC GACGACGAGG CGCCGGCCCG CGAGATGGTC
GGCGATTATT TGCGGATGCA CGGCTTCGCC GTGACCCTGT GCGACGGCGG CAAGAGCCTG
CGCGCAGAGA TCGAGACCAA GGTCCCCGAC CTCGTGGTGC TCGACCTCAA CATGCCGGAA
GAAGACGGCC TGTCGATCAT CCGCGATCTC AAGGCCAAAA CCAATGTGCC GGTGATCATG
CTGACCGCGA CCGCGAGCCC GATCGACCGC GTCGTCGGTC TCGAACTCGG CGCTGACGAT
TACGTCGCCA AGCCCTGCGA GCTGCGCGAG TTGATGGCGC GTATCCGGTC GGTGCTGCGC
CGCTCGGCGC CGAGGCCGAC CGCCGCTCCC GCGCCGGCCG CCACGCCGAC AAAGACCGCC
AACGAACAGC TGGTGCGGTT CGGCACCAAA TGGCTCGATC TCGAAGCCCA GGCGCTGCGC
GACGACGACG GCAACGAGCA CCCGCTGACG GCGTCGGAAT TCGGCCTTCT GAAAGTGTTC
GCGGCCAATC CCAAGCGGGT GCTGTCGCGC GAGCGGCTGC TGGAGCTCGC CAACGCCCGC
GACGCCGAGG CGTTCGATCG CGCCGTCGAC CTCCGGATCA TGCGGATTCG GCGCAAGATC
GAGCCCGATC CGACCAAACC GGCGGTGATC CGGACCATTC GCGGCGGCGG CTATTTGTTC
TCTCCAGCCT CAGACCGACC CTGA
|
|---|
| Protein sequence | MSQNPHIIVV DDEAPAREMV GDYLRMHGFA VTLCDGGKSL RAEIETKVPD LVVLDLNMPE
EDGLSIIRDL KAKTNVPVIM LTATASPIDR VVGLELGADD YVAKPCELRE LMARIRSVLR
RSAPRPTAAP APAATPTKTA NEQLVRFGTK WLDLEAQALR DDDGNEHPLT ASEFGLLKVF
AANPKRVLSR ERLLELANAR DAEAFDRAVD LRIMRIRRKI EPDPTKPAVI RTIRGGGYLF
SPASDRP
|
|---|
| |