Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4368 |
Symbol | |
ID | 4024893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4831741 |
End bp | 4832499 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637964578 |
Product | ABC transporter related |
Protein accession | YP_571486 |
Protein GI | 91978827 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.324003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGC TCGCCTTGCG CGCCGAGCGT CTCGGCAAGA ACTTCGGCGG CGTCCGCGCC GTCGCCGACC TGTCGATCGA GATCAAGCGC GGCGAAATTC ATGCGGTGAT CGGTCCCAAC GGCGCCGGCA AGTCGACGCT GATCAATCTG CTGTCGGGCG AACTCGCCGC CAGCGCCGGC GAGATCCGGC TCGGCGACGC CGAGATCACC GGGCTTGCGC CGGACAAGCG CGCCCGTGCC GGCATCGGCC GCGCGTTCCA GAAGACCACG ATCTTCCCGC GCTTCACCGT GCATGAAAAC GTCCGGCTCG CCGCGCAGGC GCGGTCACGC GCGCCGCTCA GGATGTTCGG CGGCGCATCG GCCGATCCCG AGGTGCAGAG TCGCACGATC GAGGCGATCG GCAAGGCCGG ACTCGCCGGG CGCGAGGCGA TCGTCGCCAA TGTGCTCAGC CATGGCGAAC AGCGTCAGCT CGAAATCGCG ATGGTGCTGG CGACGGGTCC CTCGATCATC CTGCTCGACG AGCCGCTCGC CGGCATGGGT CAGGCCGAGG CGCGCGGCAT CATCGCCTTG ATCGCGTCGT TGCGAGCGCA TCATGCGGTG CTGATCGTCG AGCACGACAT GGATGCGGTG TTCGAACTCG CCGACAAGCT CACCGTGATG CAGGACGGCC AGGTGATCGC GTCCGGCCTG CCGGAGGACG TCCGCCGGCA TCCGGCGGTG CGCGCGGCCT ATCTCGGCAA TCACGGAGAC GCGGCATGA
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Protein sequence | MPELALRAER LGKNFGGVRA VADLSIEIKR GEIHAVIGPN GAGKSTLINL LSGELAASAG EIRLGDAEIT GLAPDKRARA GIGRAFQKTT IFPRFTVHEN VRLAAQARSR APLRMFGGAS ADPEVQSRTI EAIGKAGLAG REAIVANVLS HGEQRQLEIA MVLATGPSII LLDEPLAGMG QAEARGIIAL IASLRAHHAV LIVEHDMDAV FELADKLTVM QDGQVIASGL PEDVRRHPAV RAAYLGNHGD AA
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