Gene RPD_4368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4368 
Symbol 
ID4024893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4831741 
End bp4832499 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID637964578 
ProductABC transporter related 
Protein accessionYP_571486 
Protein GI91978827 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.324003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC TCGCCTTGCG CGCCGAGCGT CTCGGCAAGA ACTTCGGCGG CGTCCGCGCC 
GTCGCCGACC TGTCGATCGA GATCAAGCGC GGCGAAATTC ATGCGGTGAT CGGTCCCAAC
GGCGCCGGCA AGTCGACGCT GATCAATCTG CTGTCGGGCG AACTCGCCGC CAGCGCCGGC
GAGATCCGGC TCGGCGACGC CGAGATCACC GGGCTTGCGC CGGACAAGCG CGCCCGTGCC
GGCATCGGCC GCGCGTTCCA GAAGACCACG ATCTTCCCGC GCTTCACCGT GCATGAAAAC
GTCCGGCTCG CCGCGCAGGC GCGGTCACGC GCGCCGCTCA GGATGTTCGG CGGCGCATCG
GCCGATCCCG AGGTGCAGAG TCGCACGATC GAGGCGATCG GCAAGGCCGG ACTCGCCGGG
CGCGAGGCGA TCGTCGCCAA TGTGCTCAGC CATGGCGAAC AGCGTCAGCT CGAAATCGCG
ATGGTGCTGG CGACGGGTCC CTCGATCATC CTGCTCGACG AGCCGCTCGC CGGCATGGGT
CAGGCCGAGG CGCGCGGCAT CATCGCCTTG ATCGCGTCGT TGCGAGCGCA TCATGCGGTG
CTGATCGTCG AGCACGACAT GGATGCGGTG TTCGAACTCG CCGACAAGCT CACCGTGATG
CAGGACGGCC AGGTGATCGC GTCCGGCCTG CCGGAGGACG TCCGCCGGCA TCCGGCGGTG
CGCGCGGCCT ATCTCGGCAA TCACGGAGAC GCGGCATGA
 
Protein sequence
MPELALRAER LGKNFGGVRA VADLSIEIKR GEIHAVIGPN GAGKSTLINL LSGELAASAG 
EIRLGDAEIT GLAPDKRARA GIGRAFQKTT IFPRFTVHEN VRLAAQARSR APLRMFGGAS
ADPEVQSRTI EAIGKAGLAG REAIVANVLS HGEQRQLEIA MVLATGPSII LLDEPLAGMG
QAEARGIIAL IASLRAHHAV LIVEHDMDAV FELADKLTVM QDGQVIASGL PEDVRRHPAV
RAAYLGNHGD AA