Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_4363 |
Symbol | |
ID | 4024888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 4825899 |
End bp | 4827308 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637964573 |
Product | lytic murein transglycosylase |
Protein accession | YP_571481 |
Protein GI | 91978822 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.831397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGAC GCAACCGGAT GACATCCGCC GTTCTGCTGG CATGGCTCGG CAGCGTGGCG CTGACGGGCG CGGCTGCGCA GGCGCAATCC TCCGGCGGCG GCAACCCGCT GAACTTTCTC GACAGCATCT TCGGCAACAC CCCGCCGGCC GGCAACCGCG CCGCGCCCGC GACCGGACCT GCTTCTGGCC CGGCGCCCGC CGGCAGCGCC GCCGCGCCGC CCTGGAGCGG CGAGGACGGC GGGTCGGGCC ATCCGCTGAT GACCGCGCAG GCGATCCGCG AAGCCGCCGG CAATTTCGAC GCCTGCGTCG CCGCGATGTG GCCGGACGCC CAGCGCCGCA ACATCTCGCG CGACAGCTTC GAGCGCTACA CCGCCGGGCT GTCGCCCGAC CTGCGGCTGA TGGATCTGAT GGATTCGCAG CCGGAATTCA CCAAGGCGAT CTGGGACTAT CTCGACATCC TGGTGAACGA CAACCGGATG GCCCGCGGCC GCGAAATCCT CGCGCAATAC AAGCCGCAAT TCGACGCGAC GGAGCGCGCC ACCGGCGTCG ACCGCTATAT CATCGCGTCG ATCTGGGGCA TCGAATCCAA CTACTCGACC CAGATGGGCG ATCGCTACGT GGTGAACTCG ACGGCGACGC TCGCCTGCGT CGGCCGCCGG CAGGCTTACT TCAAGGACGA GTTCCTCACC GCGCTGGAAA TTCTGCATCG CGGCGATCTG CGCCCCGAGC AGTTGCGCGG CTCATGGGCC GGCGCATTCG GGCCGACGCA ATTCATGCCG ACCGCGTTCA AGCGCTTCGC CGTCGACGCC GACGGCGACG GCCGCCGCGA CGTCGTCGAC AATCCCGCCG ATCTGATCGC CTCCACCGCC AACAACCTCA AGAAAGACGG CTGGCAGCCG GGCGCGACCT GGGGCTACGA GGTGGTGATG CCGAAGGGCT TCAACTACAT GATGGCCGAC CGCAAGCAGA TGCTGACGCT GGCGCAATGG CACGAGATGG GCGTCAGGCG CCCGAACGGA CAGCCGTTTC CGCGCTCCGC CGAGAAGGCC TATCTGCTGG CGCCAGCGGG CTCGGAAGGC CCCGGCTTCC TGATGCTGAC GAATTTCCGC GTGATCATGA AGTACAACCC GGCCGAAGCC TATGCGCTGG CGATCGGCCA TTTCGCCGAC CGGCTGCGCG GCGGCCCGCC CTTCGTGCAA CCCTGGCCGC GCCACGAGCG GGTGTTGTCC CGGAGCGAAC GGCTCGAGCT GCAACAACTT CTCGCCCAAC GCGGCTTCTA CCGCGGCACC CCCGACGGCC AGTTCGGCAG CATGACGCGC GAGGCGCTAC GGAACTTCCA GGCGTCGATC GGCGCGCCGG CGGACGGGTT CGCGACGGGG GATATGCTGG AGAAACTAAG GGGACGATGA
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Protein sequence | MTGRNRMTSA VLLAWLGSVA LTGAAAQAQS SGGGNPLNFL DSIFGNTPPA GNRAAPATGP ASGPAPAGSA AAPPWSGEDG GSGHPLMTAQ AIREAAGNFD ACVAAMWPDA QRRNISRDSF ERYTAGLSPD LRLMDLMDSQ PEFTKAIWDY LDILVNDNRM ARGREILAQY KPQFDATERA TGVDRYIIAS IWGIESNYST QMGDRYVVNS TATLACVGRR QAYFKDEFLT ALEILHRGDL RPEQLRGSWA GAFGPTQFMP TAFKRFAVDA DGDGRRDVVD NPADLIASTA NNLKKDGWQP GATWGYEVVM PKGFNYMMAD RKQMLTLAQW HEMGVRRPNG QPFPRSAEKA YLLAPAGSEG PGFLMLTNFR VIMKYNPAEA YALAIGHFAD RLRGGPPFVQ PWPRHERVLS RSERLELQQL LAQRGFYRGT PDGQFGSMTR EALRNFQASI GAPADGFATG DMLEKLRGR
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