Gene RPD_4344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4344 
Symbol 
ID4024868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4807152 
End bp4807667 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID637964553 
Producthypothetical protein 
Protein accessionYP_571462 
Protein GI91978803 
COG category[S] Function unknown 
COG ID[COG5317] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAT TATCGCAGAG TGAAGCCCCG CTCGTCGTGC TGAGCGAACG GCTGACGAAT 
TCGGCAGCCT TCACAGCGCT GTTTCGCGAG GGGATGGATC TGGTCGAGGA GACCGCCGCG
TATCTCGACG GCGACGGCCG CGCCGAGGCG AAGACGCTCG ACCGCTCGGT CAGCCTGACC
TACGCCACCG AAAGCATGCG CCTGACCACG CGGCTGATGC AGCTCGCCTC CTGGCTTCTG
CTGCATCGGG CGGTGAAGGA AGGCGAGATG ACGCTGGTCC AGGCCAATCG CGAGAAATCC
AAGGTCAAGC TGTCGGCGGC CGATCCCAGT GGGCCGGACA TGCTGGAGCA GCTGCCGGAC
CAGTTGCAGG CGCTGATCGC CCGTTCGATG AGCCTGCAGG CGCGGATCCG GCGGCTCGAC
GCCTCGATGC ACATGCCGCC GCCCTCGGAA CGCGCGCCGA TCGGCAACCC GCTGGTGCCG
CAGCTCAATA TGCTGAAGGC AGCGTTCGAA CGCTAA
 
Protein sequence
MSELSQSEAP LVVLSERLTN SAAFTALFRE GMDLVEETAA YLDGDGRAEA KTLDRSVSLT 
YATESMRLTT RLMQLASWLL LHRAVKEGEM TLVQANREKS KVKLSAADPS GPDMLEQLPD
QLQALIARSM SLQARIRRLD ASMHMPPPSE RAPIGNPLVP QLNMLKAAFE R