| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4342 |
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| Symbol | |
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| ID | 4024866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4804559 |
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| End bp | 4806478 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637964551 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | YP_571460 |
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| Protein GI | 91978801 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.180584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAG CAAGCAAACG ACAGACCTCC GGATCCAAGG CGTTGGAACC AAAGGCCTCG
GCGATCGGAT TGTCGCTGGA CGCGATCGCG GCCACCGAGA ATGTCGGGCC GCGCACCGGC
ACGCTCCGCG CCGACGCCGA TGTCAGCCAG GTCGAGGAAG TCGAGGCGGT CGCCAAGCGC
AGCCGGCTGC GGCCGCTGCT GGCGCTGGCG CCCTATGTCG ACCATTACCG CGGCCGCGCC
CTGATGGCGC TGATCGCGCT GATCGTCGCC GCGATGACGA CGCTGATGGT GCCGCTCGCA
GTGCGGCGGC TGATCGATTT CGGCTTCAGC GGCGAAGGCA TCGAGCTGAT CAACAGCTAT
TTCAGCGTGA TGCTCGCGGT GGTCGGCGTG CTCGCGGTCG CGAGCGCCGC GCGTTACTAC
TTGGTGATGA CGATCGGCGA GCGGATCGTC GCCGATCTGC GCCGCGATGT CTTCAAGCAT
CTCACCGCGC TGTCGCCGTC GTTCTTCGAC TCCGCGCGCA GCGGCGAGTT GATCTCGCGG
CTGACCGCCG ACACCACGCA GATCAAGTCC GCGGTCGGCG CCTCGGTCTC GATCGCGCTG
CGCAACATGC TGCTGTTCGC GGGCGCGATC ACCATGATGG TGATCTCGAG CCCGCGATTG
AGCGGCATCG TGCTGGCGGC GATCCCGCTG ATCGTGATCC CGCTGGTCGC TTTCGGTCGC
TGGGTGCGGC GGCTGTCGCG CAACGCGCAG GACACGCTGG CGAACGCCTC CGCCTTCGCT
TCCGAGCTGG TCGGCGCGAT GCGCACGGTG CAGGCCTACA CCAACGAGCG GCTCGCCAAT
GCGCGGTTCG GCGCCGAGGT CGAACAGTCC TACGAGGCGG CGCGGAGTTC GACCCAGGCG
CGCGCGATCC TCACCGCGAT CATCATCTTC ATCGTGTTCG CGAGCGTGGT GGCGATCCTG
TGGGTCGGCT CGCACGACGT CGCCTCCGGC ACGATCACGC CGGGCCGGCT CGGTCAGTTT
ATTTTGTACG CGGCGTTCGC GGCCTCCAGC CTCGGCCAGC TCAGCGAAGT GTGGGGCGAG
GTCTCGGCCG CCTCCGGCGC CGCCGAGCGG TTGTTCGAGA TCCTGCGCGT CAAGCCGGCG
ATCGCGGCGC CCGCCAAGCC GCGCGCATTG CCGGTGCCGG TGCGCGGCGA CGTCACCTTC
GACAATGTCT CCTTCGCCTA CCCGACGCGG CCGGATTATC TCGCGGTGAA CGGCCTGTCG
TTGTCGATCA AGGCCGGCGA GAAGGTCGCG ATCGTCGGCC CCTCGGGCGC CGGCAAGAGC
ACGCTGTTCC ATCTGCTGCT GCGGTTCTAC GATCCCGCCG CCGGCACCAT CTTGCTGGAT
GGCGTGCCGA TCGCCTCGGC CGATCCGCAG GCGGTGCGCG AGCGCATCGC GCTGGTGCCG
CAGGACTCCG TGGTGTTCGC GGCCACCGCC CGCGACAACA TCCGGTTCGG CCGCGACGAC
GCGAGCGACG CCGATGTCGA GCGCGCCGCG CAGCAGGCCC ATGCCACCGA ATTCATCGAC
CGGCTGCCCG GCGGCTTCGA GGCGCCGCTC GGCGAGCGCG GCGTCACGCT GTCCGGCGGC
CAGCGCCAGC GCATCGCGAT CGCCCGCGCC ATCCTGCGCG ACGCGCCGCT GCTGCTGCTC
GACGAGGCCA CCTCGTCGCT CGACGCCGAA AGCGAAACGC TGGTGCAGAC CGCGCTGCAG
GGCCTGATGC GCGACCGCAC CACGCTGGTG ATCGCGCATC GGCTGGCGAC CGTGCTGTCC
TGCGATCGCA TTCTCGTCAT GGAGAACGGC CGCATCATCG ACCAGGGCAC CCACGCCCAG
CTCGTCGCCC GCGGCGGCCT CTATGCGCGG CTGGCGAAGC TGCAATTCGA GGCGGCGTAA
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| Protein sequence | MTTASKRQTS GSKALEPKAS AIGLSLDAIA ATENVGPRTG TLRADADVSQ VEEVEAVAKR
SRLRPLLALA PYVDHYRGRA LMALIALIVA AMTTLMVPLA VRRLIDFGFS GEGIELINSY
FSVMLAVVGV LAVASAARYY LVMTIGERIV ADLRRDVFKH LTALSPSFFD SARSGELISR
LTADTTQIKS AVGASVSIAL RNMLLFAGAI TMMVISSPRL SGIVLAAIPL IVIPLVAFGR
WVRRLSRNAQ DTLANASAFA SELVGAMRTV QAYTNERLAN ARFGAEVEQS YEAARSSTQA
RAILTAIIIF IVFASVVAIL WVGSHDVASG TITPGRLGQF ILYAAFAASS LGQLSEVWGE
VSAASGAAER LFEILRVKPA IAAPAKPRAL PVPVRGDVTF DNVSFAYPTR PDYLAVNGLS
LSIKAGEKVA IVGPSGAGKS TLFHLLLRFY DPAAGTILLD GVPIASADPQ AVRERIALVP
QDSVVFAATA RDNIRFGRDD ASDADVERAA QQAHATEFID RLPGGFEAPL GERGVTLSGG
QRQRIAIARA ILRDAPLLLL DEATSSLDAE SETLVQTALQ GLMRDRTTLV IAHRLATVLS
CDRILVMENG RIIDQGTHAQ LVARGGLYAR LAKLQFEAA
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