| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4338 |
|---|
| Symbol | |
|---|
| ID | 4024862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 4802327 |
|---|
| End bp | 4803352 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637964547 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_571456 |
|---|
| Protein GI | 91978797 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1360] Flagellar motor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.268779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCG GGCGCGGACG CCGCCAGGAC ACCGGCTTCA ACTACTGGCC GGGCTTCGTC
GACGCGCTGT CGACGCTGAT CCTCGCCATC GTGTTTCTGC TGTCGGTGTT CCTGGTGGTG
CAGTTCTTCC TGTCGCAGGA GGTCACCGGC AAGGACAAGG CGCTGCAGGA GCTGAACGCC
AGGCTCGCGC AGCTCAGCGA TCTGTTGTCG CTGGAGAAGC TCGGCAAGCT CAACCTTGAG
GAGCAGCTGT CCCAGGTCCG CGCCGGGCTG TCCGCCGCGC AGAGCGAGCG CGATCGCGTC
AAGGGGCTGT ATGACGGCCT CGCCGGCGCC GGCAACGACG CCGCCGGCCG CGCCGGCGAA
CTCAACAAGG CGCTGGATTC CGAGAAGCAG CTCTCCGCCC GGGCGCTGGC GCAGGTCGAG
GTGCTGAACC AGCAGATCTC GGCGCTGCGC CGCCAGCTCG CAGCCCTGGA GGAGGCGCTC
GACGCCTCGG AGAAACGCGA CAAGGAATCG CAAGGCCGGA TCGCCGATCT CGGCCAGCGG
CTGAATCTGG CGCTGGCGCA GCGGGTGCAG GAATTGTCGC GCTATCGCTC GGAGTTCTTC
GGGCGGCTGC GCGCGATCCT CGGCGACCGC CCCGATATCC GCATCGTCGG CGACCGTTTC
GTGTTCCAGT CCGAGGTTTT CTTCGACACC GGACAGGCGC TGCTGCTGCC CGAAGGCCGC
GCCGAGCTCG ACAAGCTCGC CCCCGCGCTG ACCGAACTCG ACAAGAAGAT CCCGCCGGAA
ATCGCCTGGG TGCTGCGGGT CGACGGCCAC ACCGACCGCC GCCCGATCAC CGGCGCGTTC
AAATCGAACT GGGAACTGTC GAGCGCACGC GCGATCTCGG TGGTGCAATA TCTGGTGTCG
CTCGGCGTCC CGGCGCAGCG GCTGGTCGCG GCCGGCTTCG CCGAATTCCA GCCGCTCGAC
ATCGCCAACA CCGACGACGC CTACAAGCGC AACCGCCGCA TCGAACTGAA GCTGACGGAG
CGGTGA
|
|---|
| Protein sequence | MALGRGRRQD TGFNYWPGFV DALSTLILAI VFLLSVFLVV QFFLSQEVTG KDKALQELNA
RLAQLSDLLS LEKLGKLNLE EQLSQVRAGL SAAQSERDRV KGLYDGLAGA GNDAAGRAGE
LNKALDSEKQ LSARALAQVE VLNQQISALR RQLAALEEAL DASEKRDKES QGRIADLGQR
LNLALAQRVQ ELSRYRSEFF GRLRAILGDR PDIRIVGDRF VFQSEVFFDT GQALLLPEGR
AELDKLAPAL TELDKKIPPE IAWVLRVDGH TDRRPITGAF KSNWELSSAR AISVVQYLVS
LGVPAQRLVA AGFAEFQPLD IANTDDAYKR NRRIELKLTE R
|
|---|
| |