Gene RPD_4337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4337 
Symbol 
ID4024861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4801260 
End bp4802261 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID637964546 
Producthypothetical protein 
Protein accessionYP_571455 
Protein GI91978796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0593676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTG GCCCCTCCCC CCGCTCGGCG ATGGAGATCG AACTCAGCAA GCTGTCGTCG 
CCGCGGATCT TCCTGGTGCG GATGCTGGTG TTTCTGGTGC TGTGCGCGCT GATCACGGTG
GTGCTGTACA AGCAGGTCAT AACGGCGTTC CTCGCCAATC CCGGGCTCAA CGCGCTGATC
GGAATGGTGC TGCTGATCGG CATCGTGCTG GCGTTCCGGC AGGTGATCCG GCTGTATCCC
GAAGTCGCCT GGGTCAATCA TTTCCGCATC AGCGATCCCG GCCTCGCGCT CGACCGCCGG
CCGACGCTGC TGGCGCCGAT GGCGGCGATC CTCGGCGGCG AGCGCAGCGG ACGAATCGCG
ATCTCGCCGC AGATCATGCG GCATCTGCTG GATTCGATCG CGACCCGGCT GGACGAAGCG
CGCGACATCT CGCGCTACAT GACCGGCCTG TTGGTGTTCC TCGGCCTGCT CGGCACCTTC
TGGGGCCTGA TCGAAACCGT CGGCTCGATC GGCCAGGTGG TCAGCGGGCT GAAGGTCGGC
GGCGACGCCG GCTCGCTGTT CGATACGCTG AAGGAAGGCC TCGCCGCGCC GCTCGGCGGC
ATGGGCATCT CGTTCTCGTC GTCGCTGTTC GGCCTCGCCG GCTCGCTGGT GCTGGGATTC
CTCGATCTGC AATCCAGCCA GGCGCAGAAC CGCTTCTACA CCGACCTGGA AGACTGGCTC
GCCTCCAACG TGCGCGGCGC TACCGCTGAA AACGGCGGCG GCGCCGGCAG CGGCGAACTG
CAGAACGCGC TCGAACGGCT GCGGCTGACG CTCGAAGACG GCGGCGCCAA TCGCGCCACC
ACCGCGGCGA TGGCCAACCT CGCCGAGGCG ATCCAGAATC TGGTGGCGCA TATGCGCAAC
GAGCAGCAGA TGATCCGCGA ATGGGCCGAC GCCCAGGGCG AGCAGAACCG CGAGATCAAG
GAGCTGCTGG CGCGGCTCGC GCGCCAGCCG GAGAAGCAGT GA
 
Protein sequence
MASGPSPRSA MEIELSKLSS PRIFLVRMLV FLVLCALITV VLYKQVITAF LANPGLNALI 
GMVLLIGIVL AFRQVIRLYP EVAWVNHFRI SDPGLALDRR PTLLAPMAAI LGGERSGRIA
ISPQIMRHLL DSIATRLDEA RDISRYMTGL LVFLGLLGTF WGLIETVGSI GQVVSGLKVG
GDAGSLFDTL KEGLAAPLGG MGISFSSSLF GLAGSLVLGF LDLQSSQAQN RFYTDLEDWL
ASNVRGATAE NGGGAGSGEL QNALERLRLT LEDGGANRAT TAAMANLAEA IQNLVAHMRN
EQQMIREWAD AQGEQNREIK ELLARLARQP EKQ