Gene RPD_4335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4335 
Symbol 
ID4024859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4799218 
End bp4800243 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID637964544 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_571453 
Protein GI91978794 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.139939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGG TCTCCTCGAT CATCGACGTC GCCGAGCGGG TGCCGCTGCC CGATCCCGTG 
ATCCGCGCCG CGATCAGCCG GCTGTGCGCG CGCACCGCGG CCAAGATGGC GGACGGCAAC
GAGGCGGCCG ACGCCGCCTT CGCCCGCGAG ATGGCCGCGC GCCCGGTCGC CGAGCATACC
GACGCCGCCA ACGCCCAGCA CTACGAAGTG CCGGCGGCGT TCTTCGGCAA GGTGCTCGGC
CCGAACCGGA AGTACTCGTC GTGCTTCTAC CGCGACGACA ATGCGACGTT GCAGCAGGCT
GAGGAGGATG CGCTGCGGCT GACGATGGAG CACGCCGACC TGCGCGACGG TCAGTCGGTT
CTCGAACTCG GTTGCGGTTG GGGCTCGCTG TCGCTGGCGA TGGCGCGGCA GTTTCCGTAT
TCCCGCATCG TCGCGGTGTC GAATTCGGCG TCGCAGCGCA ATTACATCGA AGCGCAGGCG
ATTCTGCGGG ATCTACCGAA TCTGCGCGTG GTCACCAGCG ACATGAACGT GTTCGAGCCG
CATGCGCGGT TCGACCGGAT CGTGTCGGTG GAGATGTTCG AGCACATGAT GAACTGGCGC
AAGCTGCTGA CCTGGATTCA CGGCTGGCTA GCGCCCGGCG GTCTGTTCTT CATGCACATC
TTCACCCATC GATGCGGGGC CTATCTGTTC GATCGCGCCG ATCGCGAGGA TTGGATCGCG
CAGCACTTCT TCACCGGCGG CGTGATGCCG AGCCACAGGC TGATCAAGCA ATACGCCGAT
CTGTTCACGG TCGAGGAGCA GTGGCGCTGG AGCGGCCGGC ACTATCAGCG GACCGCCGAG
CACTGGCTCG TCAATTTCGA CGCGCATCGC GACGAGATCG AAACCATTTT GCGGCCGGTC
TATGGCGACG ACACCGCGCT GTGGATGCGG CGATGGCGAT GGTTCTTCCT CGCCACCTCC
GGCCTGTTCG GCTACGAAGG CGGTGACGAA TGGGGCGTCA GTCACTACCG GCTGAAGCCG
GTGTGA
 
Protein sequence
MSLVSSIIDV AERVPLPDPV IRAAISRLCA RTAAKMADGN EAADAAFARE MAARPVAEHT 
DAANAQHYEV PAAFFGKVLG PNRKYSSCFY RDDNATLQQA EEDALRLTME HADLRDGQSV
LELGCGWGSL SLAMARQFPY SRIVAVSNSA SQRNYIEAQA ILRDLPNLRV VTSDMNVFEP
HARFDRIVSV EMFEHMMNWR KLLTWIHGWL APGGLFFMHI FTHRCGAYLF DRADREDWIA
QHFFTGGVMP SHRLIKQYAD LFTVEEQWRW SGRHYQRTAE HWLVNFDAHR DEIETILRPV
YGDDTALWMR RWRWFFLATS GLFGYEGGDE WGVSHYRLKP V