| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4326 |
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| Symbol | |
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| ID | 4024850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4793083 |
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| End bp | 4794060 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637964535 |
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| Product | peptidase U32 |
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| Protein accession | YP_571444 |
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| Protein GI | 91978785 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.836408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA TTTGCCCGGC GGGGACCCCC GCGGCGCTGC ACGATGCCGT CGGCGCCGGC
GCCGATGCGA TCTATTGCGG CTTCAATGAC GAGACCAATG CGCGCAACTT CCCCGGGCTG
AATTTCAGCC GCGAGGAAAT GCGGGAGTCG ATCGCGCACG CGCATCGCTA CGGCGTCACC
GTGCTGGTGG CGATCAACAC CTTCGCCCGC GCCGGCAATG TCGAATTGTG GCAGCGCGCG
GTCGACGATG CGGTCGAGGC CGAAGCCGAT GCGCTGATCC TCGCCGATGT CGGCGTGATG
GATTACTGCG CGCGGACCCA TCCGCAGCAG CGCCTGCACG TCTCGGTGCA GGCCGCGGCC
GCGAACCCGG ACTCGATCAA GTTCTACGTC GACTCCTTCA ACGCCAAGCG CGTGGTGCTG
CCGCGCGTGC TCAGCGTGCA GGAGATCGCG GCGATCACCC GCGAAGTGAA GTGCGAGACC
GAAGTGTTCA TCTTCGGCGG GCTGTGCGTG ATGGAGGAGG GCCGCTGTTC GCTGTCGTCC
TACGCCACCG GCAAATCGCC GAACATGGAC GGCGTCTGCT CGCCGGCAGG CTCGATCCAG
TATCGCGAGG AGAACGGCGC GCTGGTGTCG CGGCTCGGCG ACTTCACCAT CAACAAATTC
GCCAAGGGCG AGGCGGCGGC CTATCCGACG CTGTGCAAGG GCCGCTACCA GACCGACGAG
GGCTGCGGCT ATCTGTTCGA GGACCCGGCC TCGCTCGACG CCACCGCGAT GCTGCCGGAG
CTGCGCGCCG CCGGCGTCGC GGCGCTGAAG ATCGAAGGCC GCCAGCGCGG CCGCGCCTAT
ATCGAGCGCG TGGTGAAGAC GTTCCGCCAG GTGCTGACCG CGCTCGACGA GGGCCGCCCG
GTGCCGCCCG ACGCGTTGCG CGGCCTCAGC GAAGGCCAGT CGACCACGAC GGGCGCTTAC
AAGAAGACTT GGCGCTAG
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| Protein sequence | MELICPAGTP AALHDAVGAG ADAIYCGFND ETNARNFPGL NFSREEMRES IAHAHRYGVT
VLVAINTFAR AGNVELWQRA VDDAVEAEAD ALILADVGVM DYCARTHPQQ RLHVSVQAAA
ANPDSIKFYV DSFNAKRVVL PRVLSVQEIA AITREVKCET EVFIFGGLCV MEEGRCSLSS
YATGKSPNMD GVCSPAGSIQ YREENGALVS RLGDFTINKF AKGEAAAYPT LCKGRYQTDE
GCGYLFEDPA SLDATAMLPE LRAAGVAALK IEGRQRGRAY IERVVKTFRQ VLTALDEGRP
VPPDALRGLS EGQSTTTGAY KKTWR
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