| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4312 |
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| Symbol | |
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| ID | 4024836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4778772 |
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| End bp | 4780760 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964521 |
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| Product | transketolase |
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| Protein accession | YP_571430 |
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| Protein GI | 91978771 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGG TCGATCATTC CCGTATGGCG AACGCAATCC GGGCGCTGGC GATGGACGCG
GTCGAGAAGG CCAAATCCGG CCACCCCGGC CTGCCGATGG GCGCCGCCGA CGTCGCCACC
GTACTGTTCA CCGACTTCCT GAAATTCGAT GCCGCCGATC CGCACTGGCC GGATCGCGAC
CGCTTCATCC TCTCCGCCGG CCACGGCTCG ATGCTGCTCT ACGCACTGCT GTACCTCACC
GGCAATTCGG AGCTGACGCT CGACCAGATC AAGGCATTCC GCCAGCTCGA CTCCCGGACG
CCGGGACATC CGGAAAACTG CATCACCGAT TCGGTCGAAA CTACCACCGG CCCGCTCGGC
CAGGGCGTCG CGTCGTCGGT GGGCACCGCG CTGGCGGAGC GGCTGCTGGC TGCGGAGTTC
GGCGAGATCG TCGATCACTA CACCTATGTG CTGTGCTCGG ACGGCGATCT GATGGAAGGC
GTCAGCCACG AAGCACTGGC GCTGGCCGGC CATCTCAAGC TGTCGAAGCT GATCTTCCTC
TACGACGACA ACGGCATCTC GATCGACGGG CCGCTGACAC TGACCGACAA TGTCGACCAG
GTCGCGCGCT TCCAGGCGCA TGGCTGGAAT GCGATGCGGA TCGACGGCCA CGATCACACC
GCGATCGCCG CGGCGATCAA GGCGGCGCAG GCGTCCGACC GGCCGACCAT GATCGCCTGC
AAGACCACGA TCGGCTTCGG CGCCCCGACC CGGGCGGGCA CGTCCAAGGC GCATGGCGAG
CCGCTCGGCG CAGAAGAACT GGCCGGCGCC AAGAAGGCGC TGGGCTGGGA TTACGGCCCG
TTCGAAATCC CGGACGACGT GCTGTCGGCG TGGCGCGCGG TCGGCAGCAA GGGCGCCAAG
GCCCATGCCG CGTGGCAGAC GAAACTCGAC GCGATGGACA AGGATCTCCG CGCGGAATTC
CAGCGCCGGG TGATCGACCG CAAGCGCCCG GCCGCGCTCG ACGGCGCGAT CCGAAAACTC
AAGGACAGGC TGGTCGACGA GCCGCAGACC ATCGCCACCC GCAAGGCCAG CGAACTGGCG
CTGGAGGCGA TCGTCGAGGT GGTGCCGGAA ATGCTGCTCG GCTCGGCCGA TCTCACGCCC
TCCAACAATA CCCGCACCAA ACACGCCAAG GACGTCACGC CAGAGGATTT CTCGGGCCGT
TACATCCATT ACGGCATCCG CGAAATGGGC ATGGCGGCGG CGATGAACGG CATCGCGATG
CATGGCGGCT TCGCGCCGGC CGGCGGCACC TTCCTGTGCT TCGCCGACTA CGCCCGCCCC
TCGATGCGGA TCGCGGCGCT GTCACACGTG CCGGTGGTCT ACATCATGAC CCACGACTCG
ATCGGCCTCG GCGAAGACGG CCCGACCCAT CAGCCGGTCG AGCACCTCGC CTCGTTGCGC
GCGATGCCGA ACATGCGGGT ATTCCGCCCG GCCGATCCGG TCGAGACCGC GGAGTGCTGG
CAGCTCGCGC TCGAGAACAC CGGCGGCCCG ACGGTGCTGG CGCTGTCGCG GCAGAATCTC
ACGCCGGTGC GTACCAGCAA GTCGGACGAC AACCGCTGCG CCAAGGGCGG CTATGAGCTG
ATCGCCGCCA AGGGCAACGC CAGCGTGTCG ATCTTCGCCA CCGGCTCCGA GGTCGAGATC
GCGGTCGCCG CGCACAAATT GCTGGCCGAC AAGGGCATCA GTGCCCGCGT GGTGTCGGTG
CCGTCGCTCG ATCTGCTGCT GCTGCAGGAC GACGCGACCC GCAAGGGGAT CATCGGCGAT
GCGCCGGTCA AGGTCGCGGT CGAGGCCGCG GTGCGGTTCG GTTGGGACGC GGTGATCGGC
CCGGACGGCG GCTTCATCGG GATGTCGGGC TTCGGCGCCA GCGCTCCGGC GAAAGACCTC
TACAAGCATT TCGGCATCAC CGCCGAAGCT GTCGCGGAGG CTGCGTCAAG CCGCCTCGGG
GGCAAGTAA
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| Protein sequence | MAKVDHSRMA NAIRALAMDA VEKAKSGHPG LPMGAADVAT VLFTDFLKFD AADPHWPDRD
RFILSAGHGS MLLYALLYLT GNSELTLDQI KAFRQLDSRT PGHPENCITD SVETTTGPLG
QGVASSVGTA LAERLLAAEF GEIVDHYTYV LCSDGDLMEG VSHEALALAG HLKLSKLIFL
YDDNGISIDG PLTLTDNVDQ VARFQAHGWN AMRIDGHDHT AIAAAIKAAQ ASDRPTMIAC
KTTIGFGAPT RAGTSKAHGE PLGAEELAGA KKALGWDYGP FEIPDDVLSA WRAVGSKGAK
AHAAWQTKLD AMDKDLRAEF QRRVIDRKRP AALDGAIRKL KDRLVDEPQT IATRKASELA
LEAIVEVVPE MLLGSADLTP SNNTRTKHAK DVTPEDFSGR YIHYGIREMG MAAAMNGIAM
HGGFAPAGGT FLCFADYARP SMRIAALSHV PVVYIMTHDS IGLGEDGPTH QPVEHLASLR
AMPNMRVFRP ADPVETAECW QLALENTGGP TVLALSRQNL TPVRTSKSDD NRCAKGGYEL
IAAKGNASVS IFATGSEVEI AVAAHKLLAD KGISARVVSV PSLDLLLLQD DATRKGIIGD
APVKVAVEAA VRFGWDAVIG PDGGFIGMSG FGASAPAKDL YKHFGITAEA VAEAASSRLG
GK
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