| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4309 |
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| Symbol | |
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| ID | 4024833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4776343 |
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| End bp | 4777581 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637964518 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_571427 |
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| Protein GI | 91978768 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.439972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA TTCTTGCGAT CGATCACGTC GGCCACCGCG GCGACGGCGT CAGCCTCGCT
CAAGGCGGCG CCGTCTATGT GCCCTACGCG CTCGGCGGAG AGACGGTCGA GGCCGCGCCG
GTCGCCGGCC ATCCCGACCG CCGCAAATTG CTGCGCGTCG ATCGCGCGAG CCCGCAGCGG
ATCGCGCCGT TCTGCCCGCA TTTCGGCATC TGCGGCGGCT GCGCGATCCA GCACTGGCAG
CCGGACGCGT ACCAGGCGTG GAAGCGCGAT CTGGTGATCG AGACGCTGCG CCAGGCGAAG
ATCGATTGCG CGGTCGATCC GCTGATCGAC GCGCATGGCG CGGGCCGCCG CCGCATCACG
CTGCACGCCC GCAAGGGCAC GCATGACGTG TTGAAGGTCG GCTTCAGCGC GGTCGCGAGC
CACGACGTGA TCGCGATCGA TGCCTGCCCG ATCCTCGATC CGGCGCTGGA CGGCGCCATC
GAGGCGGCGT GGGCGCTGGC GGAAACGCTC ACCTTCATCG GCAAGCCGCT CGATATCCAG
GTCACCGCCG CCGAGAACGG TCTCGATGTC GACGTCCGCG GCTCCGGCCC GCTGCCGTCG
AAAATGATCA CGGCGCTGTC CAGAATCGCC GAGCAACACA ACCTCGCGCG GCTGACGCGG
CACGGCGAGC TGGTGCTGAT GCGGACGCCG CCGACGGTGA TGATCGGCCA GGCGCGGGTG
ACGCTGCCGC CGGGCGCGTT CCTGCAGGCG ACCGCGCTCG GCGAACAGAC GCTGGCGGAG
CTGGCGCTGG CGCAGATCCA GCGCGCCAAG CTGATCGCCG ATCTGTTCTG CGGCGTCGGC
CCGTTCGCGC TACGGCTCGC GGCGAAAGCG CGGGTGTTCG CCTGTGACAG CGACGCGCCC
GCGGTGAACG CGCTGCAGAA GGCCGCGCAG GCGACGTCGG GACTGAAGCC GATCAAGGCC
GAGCCGCGCG ATCTGTTCCG CCGGCCGTTG GCGCCGCCGG AGTTGCTCGA CTTCGACGTC
GTGCTGTTCG ATCCGCCGCG GCAGGGCGCG CAGGCGCAGG CCGCGCAACT CGCCGCCAGC
CGCGTGCCGC TGATCATCGC AGTGTCGTGC AACGCGCAGA CCTTCGCCCG CGACGCGCGG
CTCCTGATCG ATGGCGGCTA TCGGCTGGAG AAAGTGACGC CGGTCGATCA GTTCCGGCAC
ACGCCGCATG TGGAATTGGT CGGGGTGCTG CGGAAGTAG
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| Protein sequence | MTEILAIDHV GHRGDGVSLA QGGAVYVPYA LGGETVEAAP VAGHPDRRKL LRVDRASPQR
IAPFCPHFGI CGGCAIQHWQ PDAYQAWKRD LVIETLRQAK IDCAVDPLID AHGAGRRRIT
LHARKGTHDV LKVGFSAVAS HDVIAIDACP ILDPALDGAI EAAWALAETL TFIGKPLDIQ
VTAAENGLDV DVRGSGPLPS KMITALSRIA EQHNLARLTR HGELVLMRTP PTVMIGQARV
TLPPGAFLQA TALGEQTLAE LALAQIQRAK LIADLFCGVG PFALRLAAKA RVFACDSDAP
AVNALQKAAQ ATSGLKPIKA EPRDLFRRPL APPELLDFDV VLFDPPRQGA QAQAAQLAAS
RVPLIIAVSC NAQTFARDAR LLIDGGYRLE KVTPVDQFRH TPHVELVGVL RK
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