Gene RPD_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4299 
Symbol 
ID4024823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4762720 
End bp4763481 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID637964508 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_571417 
Protein GI91978758 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.243533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGC ACTTGATCGT CACCGATGAA GACGCCACGC GCGTGATCAC GATGCGGCGG 
CCGGAGAAGA AGAACGCGCT GACGCAGGAG ATGTATCGCG ACATGAGCGC GGCGATCGAC
ACCGCGCAGA ACAATCCCGA CATCCGCTGC CTGATCATCA CCGGCGGCTC CGGCGTGTTC
ACCGCCGGCA ACGACCTCGA CGATTTCCTG AAAGCCGGCA CCGACACCAG CGGCGCGGCG
CGCGCCAGCA ACGCCACCAA GTTTCTCTAC TCGCTGGCGC ATAATGTGAA GCCGATCATC
GCCGCGGTCG ACGGCATCGC GATCGGCATC GGCACCACGA TGCTGTTTCA CTGCGACTAC
GTGCTGGCCT CGACCACGGC GACGTTCTCG ACGCCGTTCA TTCAGCTCGG GCTGGTGCCG
GAGGGCGCGT CCAGCCTGCT GGCGCCGCGC ACGATGGGCA CCCACCGCGC CTTCGGCATG
CTGGTGATGG GCCACAAGGT CTCGGCCGAA CAGGCCCGCG AAGCCGGCTT CGTCAATGTC
GTGGTCGCGC CCGGCCACAC CGAGGCCGAA GCCAGGAAGG CCGCCCGCGA AATCTGCGCG
CTGCCGGCCG AAGCGGTCGC GATCTCCCGC AAGCTGATCA GGCCCGCGCC CGAAGACCTC
ACCCGAAGGA TCGATCAGGA AAGCCATCTG TTCGGCGAGC GGATGAAATC GCAGGAAGCG
ATCAGCGCCT TCATGCGGTT CTTCCAGCGG AAGAAGGCGT AG
 
Protein sequence
MSEHLIVTDE DATRVITMRR PEKKNALTQE MYRDMSAAID TAQNNPDIRC LIITGGSGVF 
TAGNDLDDFL KAGTDTSGAA RASNATKFLY SLAHNVKPII AAVDGIAIGI GTTMLFHCDY
VLASTTATFS TPFIQLGLVP EGASSLLAPR TMGTHRAFGM LVMGHKVSAE QAREAGFVNV
VVAPGHTEAE ARKAAREICA LPAEAVAISR KLIRPAPEDL TRRIDQESHL FGERMKSQEA
ISAFMRFFQR KKA