Gene RPD_4296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_4296 
Symbol 
ID4024819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4758443 
End bp4759027 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content65% 
IMG OID637964504 
ProductANTAR 
Protein accessionYP_571414 
Protein GI91978755 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0466063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CGTCGTCGTT TTCCCTGCGT GGCCGCAAGG CGCTCGTCGC CATCAAGGAC 
GAGCGCGATG GATCGATTGT TCGCCGGCAG TTCGATCGTC TCGGGATCGA GATGGCGAGT
TGGGAGCCGA GCGCAGCGCC GGGCGCCGCC GACGTGATCC TGATCGACGA TGATTATTTG
CCCCTCGCCG CGGCGGATGC GCGGGTGTTT TCTGAAGACT GCGCCGTCAT CGTCCTGCTC
GGCACCGAAA CGCCGAGTCG TCTGAAGCTG GTGCTCGACC TCGATCCGTC GTCGTTTCTG
GTGAAGCCGC TGCGGTCGGC CGGCATCTAC GCCGCGCTGG TCATGGCGTT CGAGCGGCTG
GAGCGGACGA GCGAGCTGAA GCAGCAGATC GTGAAGATGG ACGCGCGGTT GCGTTCGCGG
CGCGTGGTGC TGACCGCCGT GCTGCAGGTG ATGCAAACGC ATGCGTTGGC CGAACCCGCC
GCCTTCGCGC TCATCCGGCG CACGGCGATG CAGCAACGCA AGACGATCGA ACAGGTTGCG
GCCGAACTCG TCGCGCAGGG ATATCTGCCC CGCGCGATCG GGTAG
 
Protein sequence
MSKPSSFSLR GRKALVAIKD ERDGSIVRRQ FDRLGIEMAS WEPSAAPGAA DVILIDDDYL 
PLAAADARVF SEDCAVIVLL GTETPSRLKL VLDLDPSSFL VKPLRSAGIY AALVMAFERL
ERTSELKQQI VKMDARLRSR RVVLTAVLQV MQTHALAEPA AFALIRRTAM QQRKTIEQVA
AELVAQGYLP RAIG