| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4294 |
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| Symbol | |
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| ID | 4024817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4755467 |
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| End bp | 4756867 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964502 |
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| Product | amidase |
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| Protein accession | YP_571412 |
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| Protein GI | 91978753 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00407497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTACGA CGGATCTTCA TTATCGCGGG CTGGTGGAAG TCGGACGCGA GATCCAGGCG
AACAAGCTGT CTCCGGTCGA AGTGACGAAA GCGATGCTGC AACGCATCGA GAAGCTCGAC
GGCAAGCTCA AGAGCTACGC GTATGTCACG CCGGAGCTCG CGCTCGAAGA GGCCGCCTCG
GCCGAGAAGG AAATCGCGGC CGGCAAAGTC AAAGGCCCGC TCCACGGCGT GCCGATCGCG
GTCAAGGATC TGTGCTGGGT CAAGGGCGTC CCCGCGGCTC ACGGCATGAC GATTCATCGC
GACTATCGCC CCAGCGAGGA CGCGACGGTC GTCGCCCGTC TCAAGAATGC CGGCGCGATC
ATCCTCGGCA AGCTGCAACA GACCGAAGGC GCCTACGCGG ATCATCATCC GAAGATCGAT
CCGCCGAAGA ATCCCTGGAA TGACGAGTTG TGGTCGGGCG TATCTTCGAG CGGCTCGGGC
TCCGCCACCG CGGCGGGGCT GTGCTTCGGA TCGCTCGGAA CCGACACCGG CGGTTCGATC
CGGTTTCCCT CGGCGGCCAA TGGCGTCACG GGATTGAAGC CGACCTGGGG CCGGGTGAGC
CGCTACGGCG CTTACGAACT CGCGGCGACG CTCGATCACA TCGGCCCGAT GGCGCGCAGC
GCGATCGATT GCGGCGCGAT GCTGAGCGTG ATCGCGGGCG CCGATCCGAA GGACACGACA
GCGGTGCCGC TGCCGGTGCC GAACTACGTC GCGAATCTGC CGGGCGATCT GAAGGGCATG
GTGATCGGGG TCGACCGTCG CTGGACCAGC GAGGGCACCG ACGAAGCGGC CACCAAGGTG
TTCGAGGACG CGCTGCGCGT CGCCAAGGAC CTCGGCGCGA CCATCACCGA GATCGTCTTC
CCGGACGCGC AGGCGGTGAC CGACGATTGG TTTCCGCTCT GCGGCATCGA AACGGCGGTT
GCGCACGAGC ACACCTATCC GTCCCGCAAG GACGAATACG GGCCCGGGCT CGCAGGATTG
ATCGAGCTTG GCCGTCAGCA ATCCGGGATG GACTATCAGA AGATCGTGCT GCGGCGGGAA
GCCTTCCGCG GCGCCGTCCG CGCGGTGTTC GAAACGGTCG ATCTGATCGC GATCCCCGCG
CAGGCTTCTG CCGCGCCGAC CCTCGCCAGG ATGGCCGCGC TCGGCGAGGA CGCCTCGCTG
ATCGGCGGGC TGCTGCGCTT CACCTGTCCG TTCGACATGA CCGGAAGCCC GACGATCACG
CTGCCGGGCG GCTTCGCGCC GAATGGTGGG CCGATCGGCT TCCAGTTCGT CGGTCGTCAC
TTCGACGAGG CGCGTCTCGT GGCCGCGGGC GATGCGTTCC AGCGCGTCAC CGACTGGCAC
ACGCGCCACC CCGCCCTCTG A
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| Protein sequence | MATTDLHYRG LVEVGREIQA NKLSPVEVTK AMLQRIEKLD GKLKSYAYVT PELALEEAAS
AEKEIAAGKV KGPLHGVPIA VKDLCWVKGV PAAHGMTIHR DYRPSEDATV VARLKNAGAI
ILGKLQQTEG AYADHHPKID PPKNPWNDEL WSGVSSSGSG SATAAGLCFG SLGTDTGGSI
RFPSAANGVT GLKPTWGRVS RYGAYELAAT LDHIGPMARS AIDCGAMLSV IAGADPKDTT
AVPLPVPNYV ANLPGDLKGM VIGVDRRWTS EGTDEAATKV FEDALRVAKD LGATITEIVF
PDAQAVTDDW FPLCGIETAV AHEHTYPSRK DEYGPGLAGL IELGRQQSGM DYQKIVLRRE
AFRGAVRAVF ETVDLIAIPA QASAAPTLAR MAALGEDASL IGGLLRFTCP FDMTGSPTIT
LPGGFAPNGG PIGFQFVGRH FDEARLVAAG DAFQRVTDWH TRHPAL
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