| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4289 |
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| Symbol | |
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| ID | 4024812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4750393 |
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| End bp | 4751112 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637964497 |
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| Product | ABC transporter related |
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| Protein accession | YP_571407 |
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| Protein GI | 91978748 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00311988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGCTCG TCGAGGTGAA GGGCGTCTCC AAAAGGTTCG GCGGACTGAC CGCGGTCTCC
GACGTCGATC TGACGGTGAA GGCCGGCGAG GTCCATTGCC TGATCGGGCC GAACGGCGCC
GGCAAGAGTA CGCTGTTCAA GCTGATCGTC GGACTGTTTC CGCCGACCAG CGGCAGCATC
CTGTTCGATT CGGCGGATAT CACCGCGGAG CGCCCATATG CGCGGGTCCA GCGGGGCATG
AGCATCAAGA TGCAGGCGCC GAGCGTGTTC AAGGAATTGC CGGTGCTGCA GAACATCCAG
ATCGCCCTGC AGGAGCGCTG TTCCGGCGCG GAACGCGCGA GGGAAGAGGA GCGGCTGCTC
GATCTGCTCA ACCTCACGCA GGACCGCGAC AAGATGGCCG GCGCGCTGTC GCACGGGCAG
CAGCAATGGC TCGAGATAGG AATGGCGCTG GCCTTGCGGC CGCGGCTTCT GCTGCTCGAC
GAGCCGACCG CCGGAATGTC GCCGGAGGAG ACCTTCAAGA CCGGCGAGCT GATCAAGTCG
TTCAATGCCG GGGGCATGAC GGTGCTGGTG GTGGAGCACG ACATGGCGTT CGTGCGCCAG
ATCGCGCAGC GGGTCACCGT TCTGCATCTC GGCAAGATTT TCGCGCGCGG CAGTCTCGAG
GCGATCCTGC AGGACCAGCA GGTCGCCGAG ATCTATCTCG GGAAGACCCA TGCTCACTGA
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| Protein sequence | MSLVEVKGVS KRFGGLTAVS DVDLTVKAGE VHCLIGPNGA GKSTLFKLIV GLFPPTSGSI
LFDSADITAE RPYARVQRGM SIKMQAPSVF KELPVLQNIQ IALQERCSGA ERAREEERLL
DLLNLTQDRD KMAGALSHGQ QQWLEIGMAL ALRPRLLLLD EPTAGMSPEE TFKTGELIKS
FNAGGMTVLV VEHDMAFVRQ IAQRVTVLHL GKIFARGSLE AILQDQQVAE IYLGKTHAH
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