| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4288 |
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| Symbol | |
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| ID | 4024811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 4749678 |
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| End bp | 4750403 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637964496 |
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| Product | ABC transporter related |
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| Protein accession | YP_571406 |
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| Protein GI | 91978747 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0030977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCTCACTG AACGATTGCC CACGGATCGC ATTCTGGAGG TCTCGGGACT GTGGGCGGGG
TATGGCGCCA CGCCGATCCT GCAGGGCGTC GACATGACGA TCATGCGCGG CGAGATCGTC
GGCGTGATCG GTCGCAACGG CGTCGGCAAG TCGACGCTGA TGCGCTGCAT CATCGGCCTG
CTCGACTCCT GGCGCGGCAC CATCACCTTT ATGGACCGCG ACGTTACACC GTTGCAGGCC
GACGCGCGGG CGCGCGCCGG CTTCGGCTAC ATCCCGCAGG GCCGCGACGT GTTTGCGCAA
ATGAGCGTCG AGGAGAACCT GCAGGTCGGC GAACTGATCG GCGGGCCGAG GGGCAAGAAG
CTGCCCGAGC TGGTCTACGA GTATTTCCCG CGCCTCAAGG AGCGTCGCAA GCAGATTGCG
GGCACGATGT CCGGCGGTGA GCAGCAGCAG CTCGCGATCG GGCGCGCGCT GATCGGCAAT
CCGGCGTTGA TGATCCTCGA CGAGCCGTCC GAGGGCATTC AACCGTCGAT CGTGCAGCAC
ATCTGCGAGG CGTTGAAATC GTTCCGGACC GAACTCGGCA CCACGATCAT TTTTGTCGAA
CAGAATCTGG ACACCATCCT GGCGATCGCG CAGCGCTGCT ACATCATGGA AAAGGGCCGG
ATCACGCATT CCTTGGTCGG CGACGACGTC AACGAAGACA AGGTGCGCGC GCAACTGCTG
TTGTGA
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| Protein sequence | MLTERLPTDR ILEVSGLWAG YGATPILQGV DMTIMRGEIV GVIGRNGVGK STLMRCIIGL
LDSWRGTITF MDRDVTPLQA DARARAGFGY IPQGRDVFAQ MSVEENLQVG ELIGGPRGKK
LPELVYEYFP RLKERRKQIA GTMSGGEQQQ LAIGRALIGN PALMILDEPS EGIQPSIVQH
ICEALKSFRT ELGTTIIFVE QNLDTILAIA QRCYIMEKGR ITHSLVGDDV NEDKVRAQLL
L
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